RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RGMBQ6NW40 437 aa15.68■□□□□ 0.1
CPSF4-208ENST00000452047 ZIC5Q96T25 663 aa15.68■□□□□ 0.1
CPSF4-208ENST00000452047 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
CPSF4-208ENST00000452047 GYG1P46976 350 aa15.67■□□□□ 0.1
CPSF4-208ENST00000452047 RARSP54136 660 aaKnown RBP15.67■□□□□ 0.1
CPSF4-208ENST00000452047 MTMR14Q8NCE2 650 aa15.67■□□□□ 0.1
CPSF4-208ENST00000452047 TDRD7Q8NHU6 1098 aaKnown RBP15.67■□□□□ 0.1
CPSF4-208ENST00000452047 KLHDC4Q8TBB5 520 aa15.67■□□□□ 0.1
CPSF4-208ENST00000452047 FAM84BQ96KN1 310 aaPredicted RBP15.67■□□□□ 0.1
CPSF4-208ENST00000452047 BEGAINQ9BUH8 593 aa15.67■□□□□ 0.1
CPSF4-208ENST00000452047 FAM205AQ6ZU69 1335 aa15.67■□□□□ 0.1
CPSF4-208ENST00000452047 RFX5P48382 616 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-208ENST00000452047 FKBP1BP68106 108 aa15.66■□□□□ 0.1
CPSF4-208ENST00000452047 JAG2Q9Y219 1238 aa15.66■□□□□ 0.1
CPSF4-208ENST00000452047 COL1A1P02452 1464 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-208ENST00000452047 SLC10A3P09131 477 aa15.65■□□□□ 0.1
CPSF4-208ENST00000452047 HIBADHP31937 336 aaKnown RBP15.65■□□□□ 0.1
CPSF4-208ENST00000452047 ZNF157P51786 506 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-208ENST00000452047 METTL24Q5JXM2 366 aa15.65■□□□□ 0.1
CPSF4-208ENST00000452047 PRAMEF18Q5VWM3 479 aa15.65■□□□□ 0.1
CPSF4-208ENST00000452047 APOBEC3FQ8IUX4 373 aaKnown RBP15.65■□□□□ 0.1
CPSF4-208ENST00000452047 CCDC102AQ96A19 550 aa15.65■□□□□ 0.1
CPSF4-208ENST00000452047 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
CPSF4-208ENST00000452047 PCDHAC2Q9Y5I4 1007 aa15.65■□□□□ 0.1
CPSF4-208ENST00000452047 KIF16BQ96L93 1317 aa15.65■□□□□ 0.1
CPSF4-208ENST00000452047 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-208ENST00000452047 CA12O43570 354 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 PDE8BO95263 885 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 DLGAP5Q15398 846 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 MOB2Q70IA6 237 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 FBXO33Q7Z6M2 555 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 MIER1Q8N108 512 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 TSKSQ9UJT2 592 aa15.64■□□□□ 0.09
CPSF4-208ENST00000452047 MYH13Q9UKX3 1938 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 UBTFL1P0CB47 393 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-208ENST00000452047 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 PTPN12Q05209 780 aaKnown RBP15.63■□□□□ 0.09
CPSF4-208ENST00000452047 CFAP100Q494V2 611 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 MFSD14BQ5SR56 506 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
CPSF4-208ENST00000452047 RASAL3Q86YV0 1011 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 AOX1Q06278 1338 aa15.63■□□□□ 0.09
CPSF4-208ENST00000452047 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
CPSF4-208ENST00000452047 EYA2O00167 538 aa15.62■□□□□ 0.09
CPSF4-208ENST00000452047 FGFR2P21802 821 aa15.62■□□□□ 0.09
CPSF4-208ENST00000452047 PRMT6Q96LA8 375 aaPredicted RBP15.62■□□□□ 0.09
CPSF4-208ENST00000452047 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
CPSF4-208ENST00000452047 KIF23Q02241 960 aaPredicted RBP15.61■□□□□ 0.09
CPSF4-208ENST00000452047 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
CPSF4-208ENST00000452047 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
CPSF4-208ENST00000452047 ATG9AQ7Z3C6 839 aa15.61■□□□□ 0.09
CPSF4-208ENST00000452047 MEIS3Q99687 375 aa15.61■□□□□ 0.09
CPSF4-208ENST00000452047 DEFB129Q9H1M3 183 aa15.61■□□□□ 0.09
CPSF4-208ENST00000452047 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
CPSF4-208ENST00000452047 CASP8AP2Q9UKL3 1982 aa15.6■□□□□ 0.09
CPSF4-208ENST00000452047 UBE2Q2LH0YL09 131 aa15.6■□□□□ 0.09
CPSF4-208ENST00000452047 NF2P35240 595 aa15.6■□□□□ 0.09
CPSF4-208ENST00000452047 CAVIN4Q5BKX8 364 aa15.6■□□□□ 0.09
CPSF4-208ENST00000452047 VPS37DQ86XT2 251 aa15.6■□□□□ 0.09
CPSF4-208ENST00000452047 SERPINA10Q9UK55 444 aa15.6■□□□□ 0.09
CPSF4-208ENST00000452047 TTF2Q9UNY4 1162 aaKnown RBP15.6■□□□□ 0.09
CPSF4-208ENST00000452047 IQSEC3Q9UPP2 1182 aaPredicted RBP15.6■□□□□ 0.09
CPSF4-208ENST00000452047 LAMB1P07942 1786 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 CLRN2A0PK11 232 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 MYO1BO43795 1136 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 CIAO1O76071 339 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 TRIM27P14373 513 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 BCAMP50895 628 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 GRIK5Q16478 980 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 CSRNP1Q96S65 589 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 PPP2R3BQ9Y5P8 575 aa15.59■□□□□ 0.09
CPSF4-208ENST00000452047 BCAR3O75815 825 aa15.58■□□□□ 0.08
CPSF4-208ENST00000452047 IFIT1P09914 478 aaKnown RBP15.58■□□□□ 0.08
CPSF4-208ENST00000452047 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
CPSF4-208ENST00000452047 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.08
CPSF4-208ENST00000452047 LPIN2Q92539 896 aa15.58■□□□□ 0.08
CPSF4-208ENST00000452047 SIL1Q9H173 461 aa15.58■□□□□ 0.08
CPSF4-208ENST00000452047 SAGE1Q9NXZ1 904 aa15.58■□□□□ 0.08
CPSF4-208ENST00000452047 OTOFQ9HC10 1997 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.083e-9■□□□□ 10.6
CPSF4-208ENST00000452047 CHAF1AQ13111 956 aaPredicted RBP15.57■□□□□ 0.08
CPSF4-208ENST00000452047 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 LDLRAD1Q5T700 205 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 TBC1D22AQ8WUA7 517 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 VEZTQ9HBM0 779 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 HDAC5Q9UQL6 1122 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 TNNQ9UQP3 1299 aa15.57■□□□□ 0.08
CPSF4-208ENST00000452047 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
CPSF4-208ENST00000452047 SLC5A1P13866 664 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 CRKP46108 304 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 PRKG1Q13976 671 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 ARMC9Q7Z3E5 817 aa15.56■□□□□ 0.08
CPSF4-208ENST00000452047 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
CPSF4-208ENST00000452047 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
CPSF4-208ENST00000452047 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms