RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 ZNF280AP59817 542 aaPredicted RBP16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 TFCP2Q12800 502 aa16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 AAMPQ13685 434 aa16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
SNRNP27-203ENST00000450162 SCN9AQ15858 1988 aa16.13■□□□□ 0.17
SNRNP27-203ENST00000450162 BCAMP50895 628 aa16.13■□□□□ 0.17
SNRNP27-203ENST00000450162 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
SNRNP27-203ENST00000450162 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
SNRNP27-203ENST00000450162 HDAC9Q9UKV0 1011 aa16.13■□□□□ 0.17
SNRNP27-203ENST00000450162 SEMA3EO15041 775 aa16.12■□□□□ 0.17
SNRNP27-203ENST00000450162 PSME4Q14997 1843 aa16.12■□□□□ 0.17
SNRNP27-203ENST00000450162 A0A1B0GUL7 405 aa16.11■□□□□ 0.17
SNRNP27-203ENST00000450162 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
SNRNP27-203ENST00000450162 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
SNRNP27-203ENST00000450162 TIMM10P62072 90 aa16.11■□□□□ 0.17
SNRNP27-203ENST00000450162 SUGT1Q9Y2Z0 365 aa16.11■□□□□ 0.17
SNRNP27-203ENST00000450162 HSPA6P17066 643 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 KIF4BQ2VIQ3 1234 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 MFSD14BQ5SR56 506 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 SAMD7Q7Z3H4 446 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 WDR66Q8TBY9 1149 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 MYOZ2Q9NPC6 264 aa16.1■□□□□ 0.17
SNRNP27-203ENST00000450162 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 HIRAP54198 1017 aaPredicted RBP16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 TBC1D10BQ4KMP7 808 aaPredicted RBP16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 GORABQ5T7V8 394 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 SIRT2Q8IXJ6 389 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 DENND2AQ9ULE3 1009 aa16.09■□□□□ 0.17
SNRNP27-203ENST00000450162 SHTN1A0MZ66 631 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 ITGBL1O95965 494 aaPredicted RBP16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 APLP1P51693 650 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 TNNI3KQ59H18 835 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 CDC37L1Q7L3B6 337 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 KIAA0825Q8IV33 1275 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 CERS5Q8N5B7 392 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 MXD3Q9BW11 206 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 MRIQ9BWK5 157 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 PDS5AQ29RF7 1337 aaKnown RBP16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 ADAMTSL1Q8N6G6 1762 aa16.08■□□□□ 0.16
SNRNP27-203ENST00000450162 HDLBPQ00341 1268 aaKnown RBP16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 MAP1SQ66K74 1059 aaPredicted RBP16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 MTMR14Q8NCE2 650 aa16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 KIF1BPQ96EK5 621 aa16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 EXOC6BQ9Y2D4 811 aa16.07■□□□□ 0.16
SNRNP27-203ENST00000450162 MAST3O60307 1309 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 PASKQ96RG2 1323 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 ADORA1P30542 326 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 PHKA1P46020 1223 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 CHAF1AQ13111 956 aaPredicted RBP16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 SCARF1Q14162 830 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 CCDC158Q5M9N0 1113 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 RHPN1Q8TCX5 695 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
SNRNP27-203ENST00000450162 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 EGFRP00533 1210 aa16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 DLGAP5Q15398 846 aa16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 CLASRPQ8N2M8 674 aaKnown RBP16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 ZNF512BQ96KM6 892 aaPredicted RBP16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.05■□□□□ 0.16
SNRNP27-203ENST00000450162 WNT10BO00744 389 aa16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 MYO1BO43795 1136 aa16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 IGSF3O75054 1194 aa16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 ARID4AP29374 1257 aaPredicted RBP16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 ZBED3Q96IU2 234 aaPredicted RBP16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
SNRNP27-203ENST00000450162 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 SPTY2D1Q68D10 685 aaPredicted RBP16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 KRT26Q7Z3Y9 468 aa16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 EAF2Q96CJ1 260 aaPredicted RBP16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 DCTPP1Q9H773 170 aa16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
SNRNP27-203ENST00000450162 NBPF9Q3BBW0 867 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 CFAP100Q494V2 611 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 TTC39AQ5SRH9 613 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 HHIPL2Q6UWX4 724 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 CREBZFQ9NS37 354 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 GGA3Q9NZ52 723 aa16.02■□□□□ 0.16
SNRNP27-203ENST00000450162 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms