RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 FRAT2O75474 233 aaPredicted RBP27.52■■■□□ 2
CPSF7-208ENST00000450000 FKBP1AP62942 108 aaKnown RBP27.52■■■□□ 2
CPSF7-208ENST00000450000 PRAMEF18Q5VWM3 479 aa27.52■■■□□ 2
CPSF7-208ENST00000450000 IRS2Q9Y4H2 1338 aa27.51■■□□□ 1.99
CPSF7-208ENST00000450000 KIF23Q02241 960 aaPredicted RBP27.51■■□□□ 1.99
CPSF7-208ENST00000450000 CAVIN4Q5BKX8 364 aa27.51■■□□□ 1.99
CPSF7-208ENST00000450000 API5Q9BZZ5 524 aaKnown RBP27.51■■□□□ 1.99
CPSF7-208ENST00000450000 USP44Q9H0E7 712 aa27.51■■□□□ 1.99
CPSF7-208ENST00000450000 HDAC5Q9UQL6 1122 aa27.51■■□□□ 1.99
CPSF7-208ENST00000450000 THSD7BQ9C0I4 1608 aa27.51■■□□□ 1.99
CPSF7-208ENST00000450000 POLR2AP24928 1970 aaKnown RBP27.5■■□□□ 1.99
CPSF7-208ENST00000450000 GYG1P46976 350 aa27.5■■□□□ 1.99
CPSF7-208ENST00000450000 TRMT2AQ8IZ69 625 aaKnown RBP27.5■■□□□ 1.99
CPSF7-208ENST00000450000 ANKRD44Q8N8A2 993 aa27.5■■□□□ 1.99
CPSF7-208ENST00000450000 NOB1Q9ULX3 412 aaKnown RBP27.5■■□□□ 1.99
CPSF7-208ENST00000450000 RIPOR2Q9Y4F9 1068 aa27.5■■□□□ 1.99
CPSF7-208ENST00000450000 FAM155AB1AL88 458 aaPredicted RBP27.49■■□□□ 1.99
CPSF7-208ENST00000450000 SLC10A3P09131 477 aa27.49■■□□□ 1.99
CPSF7-208ENST00000450000 CFAP100Q494V2 611 aa27.49■■□□□ 1.99
CPSF7-208ENST00000450000 ARMC9Q7Z3E5 817 aa27.49■■□□□ 1.99
CPSF7-208ENST00000450000 CERS5Q8N5B7 392 aa27.49■■□□□ 1.99
CPSF7-208ENST00000450000 ZIC5Q96T25 663 aa27.49■■□□□ 1.99
CPSF7-208ENST00000450000 UBE2Q2LH0YL09 131 aa27.48■■□□□ 1.99
CPSF7-208ENST00000450000 UBTFL1P0CB47 393 aaPredicted RBP27.48■■□□□ 1.99
CPSF7-208ENST00000450000 LRRC24Q50LG9 513 aa27.48■■□□□ 1.99
CPSF7-208ENST00000450000 REM2Q8IYK8 340 aaPredicted RBP27.48■■□□□ 1.99
CPSF7-208ENST00000450000 MFSD14BQ5SR56 506 aa27.47■■□□□ 1.99
CPSF7-208ENST00000450000 PRKG1Q13976 671 aa27.46■■□□□ 1.99
CPSF7-208ENST00000450000 MTMR14Q8NCE2 650 aa27.46■■□□□ 1.99
CPSF7-208ENST00000450000 TDRD7Q8NHU6 1098 aaKnown RBP27.46■■□□□ 1.99
CPSF7-208ENST00000450000 FAM84BQ96KN1 310 aaPredicted RBP27.46■■□□□ 1.99
CPSF7-208ENST00000450000 VEZTQ9HBM0 779 aa27.46■■□□□ 1.99
CPSF7-208ENST00000450000 PDE8BO95263 885 aa27.45■■□□□ 1.98
CPSF7-208ENST00000450000 MOB2Q70IA6 237 aa27.45■■□□□ 1.98
CPSF7-208ENST00000450000 RASAL3Q86YV0 1011 aa27.45■■□□□ 1.98
CPSF7-208ENST00000450000 KLHDC4Q8TBB5 520 aa27.45■■□□□ 1.98
CPSF7-208ENST00000450000 DEFB129Q9H1M3 183 aa27.45■■□□□ 1.98
CPSF7-208ENST00000450000 TTF2Q9UNY4 1162 aaKnown RBP27.45■■□□□ 1.98
CPSF7-208ENST00000450000 FAM205AQ6ZU69 1335 aa27.44■■□□□ 1.98
CPSF7-208ENST00000450000 IFIT1P09914 478 aaKnown RBP27.44■■□□□ 1.98
CPSF7-208ENST00000450000 CHAF1AQ13111 956 aaPredicted RBP27.44■■□□□ 1.98
CPSF7-208ENST00000450000 ZBED3Q96IU2 234 aaPredicted RBP27.44■■□□□ 1.98
CPSF7-208ENST00000450000 CLRN2A0PK11 232 aa27.43■■□□□ 1.98
CPSF7-208ENST00000450000 SAGE1Q9NXZ1 904 aa27.43■■□□□ 1.98
CPSF7-208ENST00000450000 PPP2R3BQ9Y5P8 575 aa27.43■■□□□ 1.98
CPSF7-208ENST00000450000 SPDYE2BA6NHP3 402 aa27.42■■□□□ 1.98
CPSF7-208ENST00000450000 TRPA1O75762 1119 aa27.42■■□□□ 1.98
CPSF7-208ENST00000450000 SPDYE6P0CI01 402 aa27.42■■□□□ 1.98
CPSF7-208ENST00000450000 PUM3Q15397 648 aaKnown RBP27.42■■□□□ 1.98
CPSF7-208ENST00000450000 IQSEC3Q9UPP2 1182 aaPredicted RBP27.42■■□□□ 1.98
CPSF7-208ENST00000450000 PAPPA2Q9BXP8 1791 aa27.42■■□□□ 1.98
CPSF7-208ENST00000450000 KIF16BQ96L93 1317 aa27.41■■□□□ 1.98
CPSF7-208ENST00000450000 EYA2O00167 538 aa27.41■■□□□ 1.98
CPSF7-208ENST00000450000 SUPT20HL1Q3ZLR7 823 aa27.41■■□□□ 1.98
CPSF7-208ENST00000450000 TBC1D22AQ8WUA7 517 aa27.41■■□□□ 1.98
CPSF7-208ENST00000450000 PRMT6Q96LA8 375 aaPredicted RBP27.41■■□□□ 1.98
CPSF7-208ENST00000450000 CSRNP1Q96S65 589 aa27.41■■□□□ 1.98
CPSF7-208ENST00000450000 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.41■■□□□ 1.98
CPSF7-208ENST00000450000 ANGEL1Q9UNK9 670 aaKnown RBP27.41■■□□□ 1.98
CPSF7-208ENST00000450000 PPP1R12BO60237 982 aaPredicted RBP27.4■■□□□ 1.98
CPSF7-208ENST00000450000 RARSP54136 660 aaKnown RBP27.4■■□□□ 1.98
CPSF7-208ENST00000450000 FBXO33Q7Z6M2 555 aa27.4■■□□□ 1.98
CPSF7-208ENST00000450000 RNF186Q9NXI6 227 aa27.4■■□□□ 1.98
CPSF7-208ENST00000450000 COL1A1P02452 1464 aaPredicted RBP27.39■■□□□ 1.98
CPSF7-208ENST00000450000 IPO8O15397 1037 aaKnown RBP27.39■■□□□ 1.98
CPSF7-208ENST00000450000 SLC5A1P13866 664 aa27.39■■□□□ 1.98
CPSF7-208ENST00000450000 TNFAIP1Q13829 316 aa27.39■■□□□ 1.98
CPSF7-208ENST00000450000 ABHD8Q96I13 439 aa27.39■■□□□ 1.98
CPSF7-208ENST00000450000 SERPINA10Q9UK55 444 aa27.39■■□□□ 1.98
CPSF7-208ENST00000450000 PCDHAC2Q9Y5I4 1007 aa27.38■■□□□ 1.97
CPSF7-208ENST00000450000 VGLL2Q8N8G2 317 aa27.37■■□□□ 1.97
CPSF7-208ENST00000450000 SIL1Q9H173 461 aa27.37■■□□□ 1.97
CPSF7-208ENST00000450000 BCAMP50895 628 aa27.36■■□□□ 1.97
CPSF7-208ENST00000450000 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
CPSF7-208ENST00000450000 MKRN3Q13064 507 aaKnown RBP27.36■■□□□ 1.97
CPSF7-208ENST00000450000 DIEXFQ68CQ4 756 aaKnown RBP27.36■■□□□ 1.97
CPSF7-208ENST00000450000 LPIN2Q92539 896 aa27.36■■□□□ 1.97
CPSF7-208ENST00000450000 ARHGAP45Q92619 1136 aa27.36■■□□□ 1.97
CPSF7-208ENST00000450000 CEP126Q9P2H0 1117 aa27.36■■□□□ 1.97
CPSF7-208ENST00000450000 LRRFIP2Q9Y608 721 aaKnown RBP27.36■■□□□ 1.97
CPSF7-208ENST00000450000 A0A1B0GUL6 1792 aa27.35■■□□□ 1.97
CPSF7-208ENST00000450000 CRKP46108 304 aa27.35■■□□□ 1.97
CPSF7-208ENST00000450000 TNNI2P48788 182 aa27.35■■□□□ 1.97
CPSF7-208ENST00000450000 SLC10A4Q96EP9 437 aa27.35■■□□□ 1.97
CPSF7-208ENST00000450000 FBXO3Q9UK99 471 aa27.35■■□□□ 1.97
CPSF7-208ENST00000450000 ZNF646O15015 1829 aaPredicted RBP27.34■■□□□ 1.97
CPSF7-208ENST00000450000 GNAI3P08754 354 aa27.34■■□□□ 1.97
CPSF7-208ENST00000450000 RFX5P48382 616 aaPredicted RBP27.34■■□□□ 1.97
CPSF7-208ENST00000450000 SREBF2Q12772 1141 aa27.34■■□□□ 1.97
CPSF7-208ENST00000450000 DGKZQ13574 1117 aa27.34■■□□□ 1.97
CPSF7-208ENST00000450000 RASA3Q14644 834 aa27.34■■□□□ 1.97
CPSF7-208ENST00000450000 DZIP1LQ8IYY4 767 aaKnown RBP27.34■■□□□ 1.97
CPSF7-208ENST00000450000 FRAT1Q92837 279 aaPredicted RBP27.34■■□□□ 1.97
CPSF7-208ENST00000450000 TDRD3Q9H7E2 651 aaKnown RBP27.34■■□□□ 1.97
CPSF7-208ENST00000450000 CCDC85CA6NKD9 419 aa27.33■■□□□ 1.97
CPSF7-208ENST00000450000 GNL3LQ9NVN8 582 aaKnown RBP27.33■■□□□ 1.97
CPSF7-208ENST00000450000 ZNF70Q9UC06 446 aaPredicted RBP27.33■■□□□ 1.97
CPSF7-208ENST00000450000 CIAO1O76071 339 aa27.32■■□□□ 1.96
CPSF7-208ENST00000450000 IREB2P48200 963 aaKnown RBP27.32■■□□□ 1.96
CPSF7-208ENST00000450000 HNRNPUQ00839 825 aaKnown RBP eCLIP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms