RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GYG1P46976 350 aa19.13■□□□□ 0.65
CHD3-205ENST00000449744 FKBP1AP62942 108 aaKnown RBP19.13■□□□□ 0.65
CHD3-205ENST00000449744 NOGQ13253 232 aa19.13■□□□□ 0.65
CHD3-205ENST00000449744 LRRC24Q50LG9 513 aa19.13■□□□□ 0.65
CHD3-205ENST00000449744 VPS37DQ86XT2 251 aa19.13■□□□□ 0.65
CHD3-205ENST00000449744 SCAF8Q9UPN6 1271 aaKnown RBP19.13■□□□□ 0.65
CHD3-205ENST00000449744 JAG2Q9Y219 1238 aa19.13■□□□□ 0.65
CHD3-205ENST00000449744 F8W031 263 aaPredicted RBP19.12■□□□□ 0.65
CHD3-205ENST00000449744 DLGAP5Q15398 846 aa19.12■□□□□ 0.65
CHD3-205ENST00000449744 CERS5Q8N5B7 392 aa19.12■□□□□ 0.65
CHD3-205ENST00000449744 KLHDC4Q8TBB5 520 aa19.12■□□□□ 0.65
CHD3-205ENST00000449744 CCDC102AQ96A19 550 aa19.12■□□□□ 0.65
CHD3-205ENST00000449744 PDE8BO95263 885 aa19.11■□□□□ 0.65
CHD3-205ENST00000449744 HSPA8P11142 646 aaKnown RBP19.11■□□□□ 0.65
CHD3-205ENST00000449744 NF2P35240 595 aa19.11■□□□□ 0.65
CHD3-205ENST00000449744 ZNF157P51786 506 aaPredicted RBP19.11■□□□□ 0.65
CHD3-205ENST00000449744 FKBP1BP68106 108 aa19.11■□□□□ 0.65
CHD3-205ENST00000449744 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHD3-205ENST00000449744 CAVIN4Q5BKX8 364 aa19.11■□□□□ 0.65
CHD3-205ENST00000449744 APOBEC3FQ8IUX4 373 aaKnown RBP19.11■□□□□ 0.65
CHD3-205ENST00000449744 TDRD7Q8NHU6 1098 aaKnown RBP19.11■□□□□ 0.65
CHD3-205ENST00000449744 FAM84BQ96KN1 310 aaPredicted RBP19.11■□□□□ 0.65
CHD3-205ENST00000449744 FAM205AQ6ZU69 1335 aa19.1■□□□□ 0.65
CHD3-205ENST00000449744 ARHGAP45Q92619 1136 aa19.1■□□□□ 0.65
CHD3-205ENST00000449744 IPO8O15397 1037 aaKnown RBP19.09■□□□□ 0.65
CHD3-205ENST00000449744 MYO1BO43795 1136 aa19.09■□□□□ 0.65
CHD3-205ENST00000449744 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
CHD3-205ENST00000449744 RBM5P52756 815 aaKnown RBP eCLIP19.09■□□□□ 0.65
CHD3-205ENST00000449744 TTLL12Q14166 644 aaPredicted RBP19.09■□□□□ 0.65
CHD3-205ENST00000449744 MFSD14BQ5SR56 506 aa19.09■□□□□ 0.65
CHD3-205ENST00000449744 PRAMEF18Q5VWM3 479 aa19.09■□□□□ 0.65
CHD3-205ENST00000449744 EYA2O00167 538 aa19.08■□□□□ 0.64
CHD3-205ENST00000449744 CA12O43570 354 aa19.08■□□□□ 0.64
CHD3-205ENST00000449744 IFIT1P09914 478 aaKnown RBP19.08■□□□□ 0.64
CHD3-205ENST00000449744 CFAP100Q494V2 611 aa19.08■□□□□ 0.64
CHD3-205ENST00000449744 MTMR14Q8NCE2 650 aa19.08■□□□□ 0.64
CHD3-205ENST00000449744 ZBED3Q96IU2 234 aaPredicted RBP19.08■□□□□ 0.64
CHD3-205ENST00000449744 PAPPA2Q9BXP8 1791 aa19.07■□□□□ 0.64
CHD3-205ENST00000449744 RFX5P48382 616 aaPredicted RBP19.07■□□□□ 0.64
CHD3-205ENST00000449744 PUM3Q15397 648 aaKnown RBP19.07■□□□□ 0.64
CHD3-205ENST00000449744 FBXO33Q7Z6M2 555 aa19.07■□□□□ 0.64
CHD3-205ENST00000449744 VGLL2Q8N8G2 317 aa19.07■□□□□ 0.64
CHD3-205ENST00000449744 FRAT1Q92837 279 aaPredicted RBP19.07■□□□□ 0.64
CHD3-205ENST00000449744 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
CHD3-205ENST00000449744 FAM155AB1AL88 458 aaPredicted RBP19.06■□□□□ 0.64
CHD3-205ENST00000449744 PTPN12Q05209 780 aaKnown RBP19.06■□□□□ 0.64
CHD3-205ENST00000449744 CHAF1AQ13111 956 aaPredicted RBP19.06■□□□□ 0.64
CHD3-205ENST00000449744 INTS3Q68E01 1043 aaKnown RBP19.06■□□□□ 0.64
CHD3-205ENST00000449744 ZIC5Q96T25 663 aa19.06■□□□□ 0.64
CHD3-205ENST00000449744 TTF2Q9UNY4 1162 aaKnown RBP19.06■□□□□ 0.64
CHD3-205ENST00000449744 IQSEC3Q9UPP2 1182 aaPredicted RBP19.06■□□□□ 0.64
CHD3-205ENST00000449744 SPDYE2BA6NHP3 402 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 GNAI3P08754 354 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 SLC10A3P09131 477 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 SPDYE6P0CI01 402 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 SLC5A1P13866 664 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 KIF23Q02241 960 aaPredicted RBP19.05■□□□□ 0.64
CHD3-205ENST00000449744 MOB2Q70IA6 237 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 MEIS3Q99687 375 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 SIL1Q9H173 461 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 TSKSQ9UJT2 592 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 FBXO3Q9UK99 471 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 PCDHAC2Q9Y5I4 1007 aa19.05■□□□□ 0.64
CHD3-205ENST00000449744 CLRN2A0PK11 232 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 UBE2Q2LH0YL09 131 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 BCAR3O75815 825 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 BCAMP50895 628 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 ATF7IPQ6VMQ6 1270 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 TBC1D22AQ8WUA7 517 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 PRMT6Q96LA8 375 aaPredicted RBP19.04■□□□□ 0.64
CHD3-205ENST00000449744 DEFB129Q9H1M3 183 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 VEZTQ9HBM0 779 aa19.04■□□□□ 0.64
CHD3-205ENST00000449744 COL1A1P02452 1464 aaPredicted RBP19.03■□□□□ 0.64
CHD3-205ENST00000449744 CIAO1O76071 339 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 FGFR2P21802 821 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 ARMC9Q7Z3E5 817 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 RASAL3Q86YV0 1011 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 LPIN2Q92539 896 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 CEP126Q9P2H0 1117 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 SERPINA10Q9UK55 444 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 PPP2R3BQ9Y5P8 575 aa19.03■□□□□ 0.64
CHD3-205ENST00000449744 TRIM27P14373 513 aa19.02■□□□□ 0.64
CHD3-205ENST00000449744 PRKG1Q13976 671 aa19.02■□□□□ 0.64
CHD3-205ENST00000449744 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
CHD3-205ENST00000449744 IL15P40933 162 aaPredicted RBP19.01■□□□□ 0.63
CHD3-205ENST00000449744 REM2Q8IYK8 340 aaPredicted RBP19.01■□□□□ 0.63
CHD3-205ENST00000449744 CLUAP1Q96AJ1 413 aa19.01■□□□□ 0.63
CHD3-205ENST00000449744 ANGEL1Q9UNK9 670 aaKnown RBP19.01■□□□□ 0.63
CHD3-205ENST00000449744 ECM29Q5VYK3 1845 aa19.01■□□□□ 0.63
CHD3-205ENST00000449744 CRKP46108 304 aa19■□□□□ 0.63
CHD3-205ENST00000449744 TNFAIP1Q13829 316 aa19■□□□□ 0.63
CHD3-205ENST00000449744 ATP2B3Q16720 1220 aa19■□□□□ 0.63
CHD3-205ENST00000449744 SUPT20HL1Q3ZLR7 823 aa19■□□□□ 0.63
CHD3-205ENST00000449744 ZKSCAN2Q63HK3 967 aa19■□□□□ 0.63
CHD3-205ENST00000449744 ABHD8Q96I13 439 aa19■□□□□ 0.63
CHD3-205ENST00000449744 PA2G4Q9UQ80 394 aaKnown RBP19■□□□□ 0.63
CHD3-205ENST00000449744 ARAP2Q8WZ64 1704 aa19■□□□□ 0.63
CHD3-205ENST00000449744 PPP1R12BO60237 982 aaPredicted RBP18.99■□□□□ 0.63
CHD3-205ENST00000449744 DZIP1LQ8IYY4 767 aaKnown RBP18.99■□□□□ 0.63
CHD3-205ENST00000449744 CSRNP1Q96S65 589 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms