RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
SMPD4-211ENST00000449159 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-211ENST00000449159 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
SMPD4-211ENST00000449159 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
SMPD4-211ENST00000449159 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
SMPD4-211ENST00000449159 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
SMPD4-211ENST00000449159 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-211ENST00000449159 PASKQ96RG2 1323 aa13.11□□□□□ -0.31
SMPD4-211ENST00000449159 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-211ENST00000449159 GMPSP49915 693 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-211ENST00000449159 SCNN1DP51172 638 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 GTF2IP78347 998 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 HDAC1Q13547 482 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-211ENST00000449159 TNIP1Q15025 636 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 CAVIN4Q5BKX8 364 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
SMPD4-211ENST00000449159 KIF1BPQ96EK5 621 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
SMPD4-211ENST00000449159 DBNLQ9UJU6 430 aaKnown RBP13.1□□□□□ -0.31
SMPD4-211ENST00000449159 MYO5AQ9Y4I1 1855 aaKnown RBP13.1□□□□□ -0.31
SMPD4-211ENST00000449159 RAB11FIP3O75154 756 aa13.09□□□□□ -0.31
SMPD4-211ENST00000449159 IGHDP01880 384 aa13.09□□□□□ -0.31
SMPD4-211ENST00000449159 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
SMPD4-211ENST00000449159 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
SMPD4-211ENST00000449159 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-211ENST00000449159 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-211ENST00000449159 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-211ENST00000449159 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
SMPD4-211ENST00000449159 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
SMPD4-211ENST00000449159 RSBN1LQ6PCB5 846 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-211ENST00000449159 AACSQ86V21 672 aa13.08□□□□□ -0.32
SMPD4-211ENST00000449159 GMLQ99445 158 aa13.08□□□□□ -0.32
SMPD4-211ENST00000449159 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
SMPD4-211ENST00000449159 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.32
SMPD4-211ENST00000449159 EPS15P42566 896 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 SCARF1Q14162 830 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 GRIK5Q16478 980 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 EAPPQ56P03 285 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-211ENST00000449159 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 PI16Q6UXB8 463 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 AIDAQ96BJ3 306 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 GPRC5DQ9NZD1 345 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 HACL1Q9UJ83 578 aa13.07□□□□□ -0.32
SMPD4-211ENST00000449159 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
SMPD4-211ENST00000449159 FOXN1O15353 648 aa13.06□□□□□ -0.32
SMPD4-211ENST00000449159 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-211ENST00000449159 MICALL2Q8IY33 904 aa13.06□□□□□ -0.32
SMPD4-211ENST00000449159 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
SMPD4-211ENST00000449159 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 EGFRP00533 1210 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 RPS12P25398 132 aaKnown RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 ARID4AP29374 1257 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 LMOD1P29536 600 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 EPHX2P34913 555 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 MCAMP43121 646 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 KIAA0825Q8IV33 1275 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
SMPD4-211ENST00000449159 GNL3LQ9NVN8 582 aaKnown RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
SMPD4-211ENST00000449159 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 NEFLP07196 543 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
SMPD4-211ENST00000449159 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-211ENST00000449159 TTC39AQ5SRH9 613 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-211ENST00000449159 DPF2Q92785 391 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 SNRKQ9NRH2 765 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
SMPD4-211ENST00000449159 MYH2Q9UKX2 1941 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 SEMA3EO15041 775 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-211ENST00000449159 USP17L8P0C7I0 530 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 VEGFBP49765 207 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
SMPD4-211ENST00000449159 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-211ENST00000449159 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 DENND2AQ9ULE3 1009 aa13.03□□□□□ -0.32
SMPD4-211ENST00000449159 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms