RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KCNJ4P48050 445 aa18.24■□□□□ 0.51
USP39-206ENST00000448971 CHRNDQ07001 517 aa18.24■□□□□ 0.51
USP39-206ENST00000448971 RABL6Q3YEC7 729 aaPredicted RBP18.24■□□□□ 0.51
USP39-206ENST00000448971 ANGEL2Q5VTE6 544 aaKnown RBP18.24■□□□□ 0.51
USP39-206ENST00000448971 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
USP39-206ENST00000448971 ANKRD2Q9GZV1 360 aa18.24■□□□□ 0.51
USP39-206ENST00000448971 CNNM1Q9NRU3 951 aa18.24■□□□□ 0.51
USP39-206ENST00000448971 MED23Q9ULK4 1368 aa18.24■□□□□ 0.51
USP39-206ENST00000448971 A0A1B0GUL6 1792 aa18.23■□□□□ 0.51
USP39-206ENST00000448971 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
USP39-206ENST00000448971 LDHAL6AQ6ZMR3 332 aa18.23■□□□□ 0.51
USP39-206ENST00000448971 MEIS3Q99687 375 aa18.23■□□□□ 0.51
USP39-206ENST00000448971 PSME4Q14997 1843 aa18.22■□□□□ 0.51
USP39-206ENST00000448971 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
USP39-206ENST00000448971 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
USP39-206ENST00000448971 USP17L8P0C7I0 530 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 FKBP1BP68106 108 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 PODNQ7Z5L7 613 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 RASAL3Q86YV0 1011 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 REM2Q8IYK8 340 aaPredicted RBP18.21■□□□□ 0.51
USP39-206ENST00000448971 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 LEMD3Q9Y2U8 911 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 LRRFIP2Q9Y608 721 aaKnown RBP18.21■□□□□ 0.51
USP39-206ENST00000448971 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
USP39-206ENST00000448971 USP17L3A6NCW0 530 aa18.2■□□□□ 0.5
USP39-206ENST00000448971 USP17L4A6NCW7 530 aa18.2■□□□□ 0.5
USP39-206ENST00000448971 GNAI3P08754 354 aa18.2■□□□□ 0.5
USP39-206ENST00000448971 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
USP39-206ENST00000448971 USP17L1Q7RTZ2 530 aa18.2■□□□□ 0.5
USP39-206ENST00000448971 TMEM57Q8N5G2 664 aa18.2■□□□□ 0.5
USP39-206ENST00000448971 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
USP39-206ENST00000448971 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
USP39-206ENST00000448971 PLIN1O60240 522 aa18.19■□□□□ 0.5
USP39-206ENST00000448971 TAF5LO75529 589 aa18.19■□□□□ 0.5
USP39-206ENST00000448971 MOB2Q70IA6 237 aa18.19■□□□□ 0.5
USP39-206ENST00000448971 ITPRIPQ8IWB1 547 aa18.19■□□□□ 0.5
USP39-206ENST00000448971 DZIP1LQ8IYY4 767 aaKnown RBP18.19■□□□□ 0.5
USP39-206ENST00000448971 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
USP39-206ENST00000448971 CTU1Q7Z7A3 348 aaKnown RBP18.18■□□□□ 0.5
USP39-206ENST00000448971 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
USP39-206ENST00000448971 RCAN3Q9UKA8 241 aa18.18■□□□□ 0.5
USP39-206ENST00000448971 KLRK1P26718 216 aa18.17■□□□□ 0.5
USP39-206ENST00000448971 SOX10P56693 466 aa18.17■□□□□ 0.5
USP39-206ENST00000448971 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
USP39-206ENST00000448971 PUS3Q9BZE2 481 aaKnown RBP18.17■□□□□ 0.5
USP39-206ENST00000448971 UBE2Q2LH0YL09 131 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 METTL24Q5JXM2 366 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 DACT2Q5SW24 774 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 PRAMEF18Q5VWM3 479 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 PAPPA2Q9BXP8 1791 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 MROH5Q6ZUA9 1318 aa18.16■□□□□ 0.5
USP39-206ENST00000448971 SNAP23O00161 211 aa18.15■□□□□ 0.5
USP39-206ENST00000448971 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
USP39-206ENST00000448971 MXD3Q9BW11 206 aa18.15■□□□□ 0.5
USP39-206ENST00000448971 COA1Q9GZY4 146 aa18.15■□□□□ 0.5
USP39-206ENST00000448971 WNT10BO00744 389 aa18.14■□□□□ 0.49
USP39-206ENST00000448971 GNAI2P04899 355 aa18.14■□□□□ 0.49
USP39-206ENST00000448971 RLBP1P12271 317 aa18.14■□□□□ 0.49
USP39-206ENST00000448971 TM4SF4P48230 202 aa18.14■□□□□ 0.49
USP39-206ENST00000448971 TXNRD3Q86VQ6 643 aa18.14■□□□□ 0.49
USP39-206ENST00000448971 MS4A1P11836 297 aa18.13■□□□□ 0.49
USP39-206ENST00000448971 RFX5P48382 616 aaPredicted RBP18.13■□□□□ 0.49
USP39-206ENST00000448971 STRIP1Q5VSL9 837 aa18.13■□□□□ 0.49
USP39-206ENST00000448971 ZNF804AQ7Z570 1209 aa18.13■□□□□ 0.49
USP39-206ENST00000448971 SIL1Q9H173 461 aa18.13■□□□□ 0.49
USP39-206ENST00000448971 ZNF646O15015 1829 aaPredicted RBP18.13■□□□□ 0.49
USP39-206ENST00000448971 EYA2O00167 538 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 SRGAP3O43295 1099 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 TBC1D8O95759 1140 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 PTPN12Q05209 780 aaKnown RBP18.12■□□□□ 0.49
USP39-206ENST00000448971 PANK1Q8TE04 598 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 ZNF296Q8WUU4 475 aaPredicted RBP18.12■□□□□ 0.49
USP39-206ENST00000448971 PCDH10Q9P2E7 1040 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 HPS5Q9UPZ3 1129 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 RIPOR2Q9Y4F9 1068 aa18.12■□□□□ 0.49
USP39-206ENST00000448971 UBE4AQ14139 1066 aa18.11■□□□□ 0.49
USP39-206ENST00000448971 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
USP39-206ENST00000448971 OGFOD1Q8N543 542 aa18.11■□□□□ 0.49
USP39-206ENST00000448971 IRS2Q9Y4H2 1338 aa18.1■□□□□ 0.49
USP39-206ENST00000448971 MMP14P50281 582 aa18.1■□□□□ 0.49
USP39-206ENST00000448971 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
USP39-206ENST00000448971 C15orf52Q6ZUT6 534 aaKnown RBP18.1■□□□□ 0.49
USP39-206ENST00000448971 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
USP39-206ENST00000448971 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
USP39-206ENST00000448971 PA2G4Q9UQ80 394 aaKnown RBP18.1■□□□□ 0.49
USP39-206ENST00000448971 MYO3BQ8WXR4 1341 aa18.09■□□□□ 0.49
USP39-206ENST00000448971 PDE8BO95263 885 aa18.09■□□□□ 0.49
USP39-206ENST00000448971 MTX1Q13505 466 aa18.09■□□□□ 0.49
USP39-206ENST00000448971 PUM3Q15397 648 aaKnown RBP18.09■□□□□ 0.49
USP39-206ENST00000448971 TTLL5Q6EMB2 1281 aa18.09■□□□□ 0.49
USP39-206ENST00000448971 ZBED3Q96IU2 234 aaPredicted RBP18.09■□□□□ 0.49
USP39-206ENST00000448971 CD209Q9NNX6 404 aa18.09■□□□□ 0.49
USP39-206ENST00000448971 FBXO3Q9UK99 471 aa18.09■□□□□ 0.49
USP39-206ENST00000448971 GPR25O00155 361 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 CIAO1O76071 339 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 LDLRAD1Q5T700 205 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 VPS37DQ86XT2 251 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 VGLL2Q8N8G2 317 aa18.08■□□□□ 0.48
USP39-206ENST00000448971 CFHR5Q9BXR6 569 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms