RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 TOB2Q14106 344 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 FAM173BQ6P4H8 233 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CCDC73Q6ZRK6 1079 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 CHMP4CQ96CF2 233 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 PGBD1Q96JS3 809 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 ZNF396Q96N95 335 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 LLPHQ9BRT6 129 aaKnown RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 C9orf78Q9NZ63 289 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 IMPACTQ9P2X3 320 aa9.85□□□□□ -0.83
CPSF7-206ENST00000448745 TFIP11Q9UBB9 837 aaKnown RBP9.85□□□□□ -0.83
CPSF7-206ENST00000448745 ANXA1P04083 346 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 A1BGP04217 495 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 SKILP12757 684 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 ATP6V1AP38606 617 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 TERF2Q15554 542 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 NAA16Q6N069 864 aaPredicted RBP9.84□□□□□ -0.83
CPSF7-206ENST00000448745 INTS5Q6P9B9 1019 aaKnown RBP9.84□□□□□ -0.83
CPSF7-206ENST00000448745 CEP57L1Q8IYX8 460 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 CCAR2Q8N163 923 aaKnown RBP9.84□□□□□ -0.83
CPSF7-206ENST00000448745 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 BRF1Q92994 677 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 FAM227BQ96M60 508 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
CPSF7-206ENST00000448745 U3KPZ7 1027 aaPredicted RBP9.84□□□□□ -0.83
CPSF7-206ENST00000448745 CCP110O43303 1012 aa9.83□□□□□ -0.84
CPSF7-206ENST00000448745 KINO60870 393 aaKnown RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 APBA3O96018 575 aa9.83□□□□□ -0.84
CPSF7-206ENST00000448745 HSP90B1P14625 803 aaKnown RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 KCNJ6P48051 423 aa9.83□□□□□ -0.84
CPSF7-206ENST00000448745 PIP4K2AP48426 406 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 CCZ1BP86790 482 aa9.83□□□□□ -0.84
CPSF7-206ENST00000448745 CCZ1P86791 482 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 TEX13AQ9BXU3 409 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 DBF4Q9UBU7 674 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 ZNF215Q9UL58 517 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-206ENST00000448745 A0A0D9SFI3 127 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 TPM4P67936 248 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 BMS1Q14692 1282 aaKnown RBP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 TXNRD1Q16881 649 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 USPL1Q5W0Q7 1092 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 KSR2Q6VAB6 950 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 C11orf57Q6ZUT1 292 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 AMIGO3Q86WK7 504 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 CAMKK2Q96RR4 588 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 OSBPL5Q9H0X9 879 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 DDX21Q9NR30 783 aaKnown RBP eCLIP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 CCNL1Q9UK58 526 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 RCOR1Q9UKL0 485 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 CRKLP46109 303 aaKnown RBP9.82□□□□□ -0.84
CPSF7-206ENST00000448745 FAM160A1Q05DH4 1040 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 STK3Q13188 491 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 SMARCC2Q8TAQ2 1214 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 NEK1Q96PY6 1258 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 CALCOCO1Q9P1Z2 691 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 ZBTB1Q9Y2K1 713 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 UTYO14607 1347 aa9.82□□□□□ -0.84
CPSF7-206ENST00000448745 UBR3Q6ZT12 1888 aa9.81□□□□□ -0.84
CPSF7-206ENST00000448745 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-206ENST00000448745 STARD3NLO95772 234 aa9.81□□□□□ -0.84
CPSF7-206ENST00000448745 HMGB1P09429 215 aaKnown RBP9.81□□□□□ -0.84
CPSF7-206ENST00000448745 SNW1Q13573 536 aaKnown RBP9.81□□□□□ -0.84
CPSF7-206ENST00000448745 NAA30Q147X3 362 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-206ENST00000448745 SLC27A3Q5K4L6 730 aa9.81□□□□□ -0.84
CPSF7-206ENST00000448745 DHX40Q8IX18 779 aaKnown RBP9.81□□□□□ -0.84
CPSF7-206ENST00000448745 BPIFA3Q9BQP9 254 aa9.81□□□□□ -0.84
CPSF7-206ENST00000448745 MAP3K2Q9Y2U5 619 aa9.81□□□□□ -0.84
CPSF7-206ENST00000448745 CNTNAP4Q9C0A0 1308 aa9.81□□□□□ -0.84
CPSF7-206ENST00000448745 A0A0U1RQG5 324 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 USP27XA6NNY8 438 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 GRM8O00222 908 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 JAK2O60674 1132 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 PFKFB2O60825 505 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 TAF5LO75529 589 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 DDX58O95786 925 aaKnown RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 EIF5P55010 431 aaKnown RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 ELF2Q15723 593 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 RC3H1Q5TC82 1133 aaKnown RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 FBXO38Q6PIJ6 1188 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 Q6ZUG5 572 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 LINS1Q8NG48 757 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 EAF2Q96CJ1 260 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 TIGD1Q96MW7 591 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 L2HGDHQ9H9P8 463 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 CCDC87Q9NVE4 849 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 ARGLU1Q9NWB6 273 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 PA2G4Q9UQ80 394 aaKnown RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 AFDNP55196 1824 aaKnown RBP9.8□□□□□ -0.84
CPSF7-206ENST00000448745 NUP188Q5SRE5 1749 aa9.8□□□□□ -0.84
CPSF7-206ENST00000448745 DTNBO60941 627 aa9.79□□□□□ -0.84
CPSF7-206ENST00000448745 IGSF3O75054 1194 aa9.79□□□□□ -0.84
CPSF7-206ENST00000448745 SASH1O94885 1247 aa9.79□□□□□ -0.84
CPSF7-206ENST00000448745 ZRSR1Q15695 479 aaKnown RBP9.79□□□□□ -0.84
CPSF7-206ENST00000448745 EZH2Q15910 746 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms