RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 BCAS4Q8TDM0 211 aa12.27□□□□□ -0.44
LINC00342-202ENST00000448494 TBC1D5Q92609 795 aa12.27□□□□□ -0.44
LINC00342-202ENST00000448494 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.44
LINC00342-202ENST00000448494 NUP155O75694 1391 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 GOLGA6L4A6NEF3 574 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 ENO4A6NNW6 628 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00342-202ENST00000448494 SYF2O95926 243 aaKnown RBP12.27□□□□□ -0.45
LINC00342-202ENST00000448494 POLD1P28340 1107 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 ACTN3Q08043 901 aaPredicted RBP12.27□□□□□ -0.45
LINC00342-202ENST00000448494 PPFIA1Q13136 1202 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 DRP2Q13474 957 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 SLC30A9Q6PML9 568 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 FAM81AQ8TBF8 368 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.45
LINC00342-202ENST00000448494 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
LINC00342-202ENST00000448494 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
LINC00342-202ENST00000448494 A2MP01023 1474 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 ERICH2A1L162 156 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 ALDH1B1P30837 517 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 TUBB2AQ13885 445 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 SLMAPQ14BN4 828 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
LINC00342-202ENST00000448494 TSR2Q969E8 191 aaKnown RBP12.26□□□□□ -0.45
LINC00342-202ENST00000448494 TUBB2BQ9BVA1 445 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 RMI1Q9H9A7 625 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 OATP04181 439 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 CCDC178Q5BJE1 867 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 DHX40Q8IX18 779 aaKnown RBP12.26□□□□□ -0.45
LINC00342-202ENST00000448494 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 FAM76AQ8TAV0 307 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 IQCGQ9H095 443 aaKnown RBP12.26□□□□□ -0.45
LINC00342-202ENST00000448494 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
LINC00342-202ENST00000448494 CORO1CQ9ULV4 474 aaPredicted RBP12.26□□□□□ -0.45
LINC00342-202ENST00000448494 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
LINC00342-202ENST00000448494 CROCC2H7BZ55 1655 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 LIN7AO14910 233 aaPredicted RBP12.25□□□□□ -0.45
LINC00342-202ENST00000448494 GCLCP48506 637 aaPredicted RBP12.25□□□□□ -0.45
LINC00342-202ENST00000448494 ROR2Q01974 943 aaKnown RBP12.25□□□□□ -0.45
LINC00342-202ENST00000448494 IFFO1Q0D2I5 559 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 RASA3Q14644 834 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 SKIDA1Q1XH10 827 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 MIS18BP1Q6P0N0 1132 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 ACRBPQ8NEB7 543 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 TPP2P29144 1249 aaPredicted RBP12.25□□□□□ -0.45
LINC00342-202ENST00000448494 G3BP1Q13283 466 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00342-202ENST00000448494 C11orf57Q6ZUT1 292 aaPredicted RBP12.25□□□□□ -0.45
LINC00342-202ENST00000448494 IGSF22Q8N9C0 903 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 TSGA10Q9BZW7 698 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 SLC40A1Q9NP59 571 aa12.25□□□□□ -0.45
LINC00342-202ENST00000448494 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 CUTAO60888 179 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 FMNL1O95466 1100 aaPredicted RBP12.24□□□□□ -0.45
LINC00342-202ENST00000448494 SFSWAPQ12872 951 aaKnown RBP12.24□□□□□ -0.45
LINC00342-202ENST00000448494 ARHGAP22Q7Z5H3 698 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 ALS2CR12Q96Q35 445 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 PNKPQ96T60 521 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 GGA2Q9UJY4 613 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 NUB1Q9Y5A7 615 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 PCDHGC5Q9Y5F6 944 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 IQGAP1P46940 1657 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
LINC00342-202ENST00000448494 GOLGA6L7A0A1B0GV03 622 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 LRRIQ3A6PVS8 624 aaPredicted RBP12.23□□□□□ -0.45
LINC00342-202ENST00000448494 PDLIM1O00151 329 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00342-202ENST00000448494 FERP16591 822 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 RANBP1P43487 201 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 GNG11P61952 73 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
LINC00342-202ENST00000448494 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 TMC6Q7Z403 805 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 ZFAND2BQ8WV99 257 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 CCDC47Q96A33 483 aaKnown RBP12.23□□□□□ -0.45
LINC00342-202ENST00000448494 CAPS2Q9BXY5 557 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 ANO10Q9NW15 660 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 LIMCH1Q9UPQ0 1083 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 CHMP3Q9Y3E7 222 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 ADGRL3Q9HAR2 1447 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 OPA1O60313 960 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
LINC00342-202ENST00000448494 CCDC181Q5TID7 509 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 CCDC170Q8IYT3 715 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 TRIM58Q8NG06 486 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 EPAS1Q99814 870 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 OSBPL3Q9H4L5 887 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 ACTR5Q9H9F9 607 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms