RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 SEC13P55735 322 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 ARTNQ5T4W7 220 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 PNMA5Q96PV4 448 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 KRTAP9-2Q9BYQ4 174 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 ZFP64Q9NPA5 681 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 TBX22Q9Y458 520 aa11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-206ENST00000447024 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 MYO5BQ9ULV0 1848 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 TGFBR3LH3BV60 316 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 TOM1O60784 492 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 NFKB1P19838 968 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 NRG1Q02297 640 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 RTN1Q16799 776 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
SMARCE1-206ENST00000447024 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
SMARCE1-206ENST00000447024 CCINQ13939 588 aa11.44□□□□□ -0.58
SMARCE1-206ENST00000447024 FMR1NBQ8N0W7 255 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-206ENST00000447024 DMGDHQ9UI17 866 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-206ENST00000447024 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
SMARCE1-206ENST00000447024 MAFBQ9Y5Q3 323 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-206ENST00000447024 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
SMARCE1-206ENST00000447024 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
SMARCE1-206ENST00000447024 DMRTC2Q8IXT2 367 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-206ENST00000447024 MPHOSPH9Q99550 1183 aa11.43□□□□□ -0.58
SMARCE1-206ENST00000447024 LRRC7Q96NW7 1537 aa11.43□□□□□ -0.58
SMARCE1-206ENST00000447024 NKTRP30414 1462 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-206ENST00000447024 KIF1BO60333 1816 aa11.42□□□□□ -0.58
SMARCE1-206ENST00000447024 RGS9O75916 674 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-206ENST00000447024 GRNP28799 593 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-206ENST00000447024 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-206ENST00000447024 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
SMARCE1-206ENST00000447024 GLMNQ92990 594 aa11.41□□□□□ -0.58
SMARCE1-206ENST00000447024 SLC26A8Q96RN1 970 aa11.41□□□□□ -0.58
SMARCE1-206ENST00000447024 USP21Q9UK80 565 aa11.41□□□□□ -0.58
SMARCE1-206ENST00000447024 CLTCL1P53675 1640 aa11.41□□□□□ -0.58
SMARCE1-206ENST00000447024 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
SMARCE1-206ENST00000447024 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
SMARCE1-206ENST00000447024 LGR5O75473 907 aa11.4□□□□□ -0.58
SMARCE1-206ENST00000447024 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-206ENST00000447024 TP53INP1Q96A56 240 aa11.4□□□□□ -0.58
SMARCE1-206ENST00000447024 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
SMARCE1-206ENST00000447024 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.58
SMARCE1-206ENST00000447024 KRTAP9-6A0A140TA67 174 aa11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 EPB42P16452 691 aa11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 ADAMTS13Q76LX8 1427 aa11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 SSBP4Q9BWG4 385 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 RAB3GAP2Q9H2M9 1393 aa11.39□□□□□ -0.59
SMARCE1-206ENST00000447024 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-206ENST00000447024 CPB1P15086 417 aa11.38□□□□□ -0.59
SMARCE1-206ENST00000447024 CRTC2Q53ET0 693 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-206ENST00000447024 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
SMARCE1-206ENST00000447024 LARP1Q6PKG0 1096 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-206ENST00000447024 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-206ENST00000447024 NEXMIFQ5QGS0 1516 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 IGFBP4P22692 258 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 IDH3AP50213 366 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 PTK7Q13308 1070 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 GRIK5Q16478 980 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 KLK14Q9P0G3 267 aa11.37□□□□□ -0.59
SMARCE1-206ENST00000447024 INPP5BP32019 993 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 DPYDQ12882 1025 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 LRP8Q14114 963 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 NBPF11Q86T75 865 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 ZFATQ9P243 1243 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 TMEM94Q12767 1356 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
SMARCE1-206ENST00000447024 MAP3K6O95382 1288 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 PCSK7Q16549 785 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 KRT25Q7Z3Z0 450 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 FNBP4Q8N3X1 1017 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 DTWD1Q8N5C7 304 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 FRRS1LQ9P0K9 344 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
SMARCE1-206ENST00000447024 MSH6P52701 1360 aa11.34□□□□□ -0.59
SMARCE1-206ENST00000447024 ZBTB42B2RXF5 422 aa11.34□□□□□ -0.59
SMARCE1-206ENST00000447024 PLAURQ03405 335 aa11.34□□□□□ -0.59
SMARCE1-206ENST00000447024 PERM1Q5SV97 790 aa11.34□□□□□ -0.59
SMARCE1-206ENST00000447024 DHX32Q7L7V1 743 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-206ENST00000447024 XIRP1Q702N8 1843 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L15C9J2P7 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L13C9JLJ4 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L12C9JPN9 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L11C9JVI0 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L21D6R901 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L18D6R9N7 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L22D6RA61 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L17D6RBQ6 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L19D6RCP7 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L20D6RJB6 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 USP17L24Q0WX57 530 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 FBXO11Q86XK2 927 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 TRPM4Q8TD43 1214 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms