RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 HABP4Q5JVS0 413 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-206ENST00000446008 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
UBE2D4-206ENST00000446008 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
UBE2D4-206ENST00000446008 XDHP47989 1333 aa12.84□□□□□ -0.35
UBE2D4-206ENST00000446008 KIAA0100Q14667 2235 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 NF2P35240 595 aa12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 INTS3Q68E01 1043 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 R3HDMLQ9H3Y0 253 aa12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
UBE2D4-206ENST00000446008 WNT10BO00744 389 aa12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 PDE8AO60658 829 aa12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 ALDH1A1P00352 501 aa12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 INHBEP58166 350 aa12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 TTLL12Q14166 644 aaPredicted RBP12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 LDLRAD1Q5T700 205 aa12.82□□□□□ -0.36
UBE2D4-206ENST00000446008 BRCA2P51587 3418 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
UBE2D4-206ENST00000446008 LAMB1P07942 1786 aa12.8□□□□□ -0.36
UBE2D4-206ENST00000446008 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
UBE2D4-206ENST00000446008 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
UBE2D4-206ENST00000446008 LAS1LQ9Y4W2 734 aaKnown RBP12.8□□□□□ -0.36
UBE2D4-206ENST00000446008 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
UBE2D4-206ENST00000446008 MANSC4A6NHS7 340 aaPredicted RBP12.79□□□□□ -0.36
UBE2D4-206ENST00000446008 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
UBE2D4-206ENST00000446008 OTOP1Q7RTM1 612 aa12.79□□□□□ -0.36
UBE2D4-206ENST00000446008 APOBEC3FQ8IUX4 373 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-206ENST00000446008 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 SNPHO15079 494 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 ZBED3Q96IU2 234 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 CDC5LQ99459 802 aaKnown RBP12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 MYD88Q99836 296 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 COA1Q9GZY4 146 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 MYH3P11055 1940 aa12.78□□□□□ -0.36
UBE2D4-206ENST00000446008 UNCXA6NJT0 531 aa12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 SLC10A4Q96EP9 437 aa12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 MXD3Q9BW11 206 aa12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
UBE2D4-206ENST00000446008 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 FXR1P51114 621 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 PRKG1Q13976 671 aa12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 METTL22Q9BUU2 404 aaPredicted RBP12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 PTPN22Q9Y2R2 807 aa12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
UBE2D4-206ENST00000446008 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 SASH1O94885 1247 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 CTSWP56202 376 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 RALBP1Q15311 655 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 TXNRD3Q86VQ6 643 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 CCDC146Q8IYE0 955 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 ARMC5Q96C12 935 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 ERO1AQ96HE7 468 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 SPEF2Q9C093 1822 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
UBE2D4-206ENST00000446008 ECM29Q5VYK3 1845 aa12.74□□□□□ -0.37
UBE2D4-206ENST00000446008 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
UBE2D4-206ENST00000446008 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
UBE2D4-206ENST00000446008 DEFB129Q9H1M3 183 aa12.74□□□□□ -0.37
UBE2D4-206ENST00000446008 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
UBE2D4-206ENST00000446008 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 EN2P19622 333 aaPredicted RBP12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 OTUD7BQ6GQQ9 843 aa12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 GREM2Q9H772 168 aa12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 FZD1Q9UP38 647 aa12.73□□□□□ -0.37
UBE2D4-206ENST00000446008 TESPA1A2RU30 521 aaPredicted RBP12.72□□□□□ -0.37
UBE2D4-206ENST00000446008 DDX58O95786 925 aaKnown RBP12.72□□□□□ -0.37
UBE2D4-206ENST00000446008 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
UBE2D4-206ENST00000446008 CD99L2Q8TCZ2 262 aa12.72□□□□□ -0.37
UBE2D4-206ENST00000446008 CLMNQ96JQ2 1002 aa12.72□□□□□ -0.37
UBE2D4-206ENST00000446008 EFCC1Q9HA90 598 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms