RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 SYCP1Q15431 976 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 RABL6Q3YEC7 729 aaPredicted RBP16.56■□□□□ 0.24
ERCC3-203ENST00000445889 LINC00301Q8NCQ3 95 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 KIAA1468Q9P260 1216 aa16.56■□□□□ 0.24
ERCC3-203ENST00000445889 CHD2O14647 1828 aaKnown RBP16.55■□□□□ 0.24
ERCC3-203ENST00000445889 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
ERCC3-203ENST00000445889 CYP27B1O15528 508 aa16.55■□□□□ 0.24
ERCC3-203ENST00000445889 ZMYM1Q5SVZ6 1142 aa16.55■□□□□ 0.24
ERCC3-203ENST00000445889 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-203ENST00000445889 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
ERCC3-203ENST00000445889 SCARF1Q14162 830 aa16.55■□□□□ 0.24
ERCC3-203ENST00000445889 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-203ENST00000445889 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
ERCC3-203ENST00000445889 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 ERICH4A6NGS2 130 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 ZNF202O95125 648 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 CASP7P55210 303 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
ERCC3-203ENST00000445889 KDM6AO15550 1401 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-203ENST00000445889 CPLX1O14810 134 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 SPTLC2O15270 562 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 NEMFO60524 1076 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 FGAP02671 866 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 CABP4P57796 275 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 SPECC1Q5M775 1068 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 DPF2Q92785 391 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 PRC1O43663 620 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 WDHD1O75717 1129 aaPredicted RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 PPP1R13BQ96KQ4 1090 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 NAT10Q9H0A0 1025 aaKnown RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
ERCC3-203ENST00000445889 SH3TC1Q8TE82 1336 aa16.53■□□□□ 0.24
ERCC3-203ENST00000445889 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
ERCC3-203ENST00000445889 ANKLE2Q86XL3 938 aa16.52■□□□□ 0.24
ERCC3-203ENST00000445889 HELLSQ9NRZ9 838 aa16.52■□□□□ 0.24
ERCC3-203ENST00000445889 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
ERCC3-203ENST00000445889 FOXP2O15409 715 aa16.52■□□□□ 0.24
ERCC3-203ENST00000445889 ZNF446Q9NWS9 450 aa16.52■□□□□ 0.24
ERCC3-203ENST00000445889 SLIT1O75093 1534 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.23
ERCC3-203ENST00000445889 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.23
ERCC3-203ENST00000445889 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 KRT222Q8N1A0 295 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 PHKBQ93100 1093 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 CLIC6Q96NY7 704 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.23
ERCC3-203ENST00000445889 ZBTB22O15209 634 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 PFKFB1P16118 471 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-203ENST00000445889 ERO1AQ96HE7 468 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 HPS5Q9UPZ3 1129 aa16.51■□□□□ 0.23
ERCC3-203ENST00000445889 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 AGXT2Q9BYV1 514 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 NEDD4P46934 1319 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 ZAP70P43403 619 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 PNOCQ13519 176 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 MROH7-TTC4A0A0A0MT08 1334 aa16.5■□□□□ 0.23
ERCC3-203ENST00000445889 ANTXR2P58335 489 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 NCAPHQ15003 741 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 EYA2O00167 538 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 TERF2Q15554 542 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 H7C1W4 665 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 APPP05067 770 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 FANCCQ00597 558 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 TTC39AQ5SRH9 613 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
ERCC3-203ENST00000445889 CWC25Q9NXE8 425 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-203ENST00000445889 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
ERCC3-203ENST00000445889 SERPINC1P01008 464 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
ERCC3-203ENST00000445889 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 FANCGO15287 622 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 FOXN1O15353 648 aa16.48■□□□□ 0.23
ERCC3-203ENST00000445889 IL15P40933 162 aaPredicted RBP16.48■□□□□ 0.23
ERCC3-203ENST00000445889 GSDMDP57764 484 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms