RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
HLA-F-221ENST00000444621 ZNF296Q8WUU4 475 aaPredicted RBP13.85□□□□□ -0.19
HLA-F-221ENST00000444621 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
HLA-F-221ENST00000444621 ASTN2O75129 1339 aaPredicted RBP13.85□□□□□ -0.19
HLA-F-221ENST00000444621 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 TBC1D8O95759 1140 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 USP17L8P0C7I0 530 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 KIF4BQ2VIQ3 1234 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
HLA-F-221ENST00000444621 STRIP1Q5VSL9 837 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
HLA-F-221ENST00000444621 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
HLA-F-221ENST00000444621 ATF7IPQ6VMQ6 1270 aa13.83□□□□□ -0.2
HLA-F-221ENST00000444621 PAPPA2Q9BXP8 1791 aa13.83□□□□□ -0.2
HLA-F-221ENST00000444621 BCAR3O75815 825 aa13.82□□□□□ -0.2
HLA-F-221ENST00000444621 CAVIN4Q5BKX8 364 aa13.82□□□□□ -0.2
HLA-F-221ENST00000444621 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
HLA-F-221ENST00000444621 INTS3Q68E01 1043 aaKnown RBP13.82□□□□□ -0.2
HLA-F-221ENST00000444621 C15orf52Q6ZUT6 534 aaKnown RBP13.82□□□□□ -0.2
HLA-F-221ENST00000444621 FTSJ3Q8IY81 847 aaKnown RBP13.82□□□□□ -0.2
HLA-F-221ENST00000444621 KAZALD1Q96I82 304 aa13.82□□□□□ -0.2
HLA-F-221ENST00000444621 CD209Q9NNX6 404 aa13.82□□□□□ -0.2
HLA-F-221ENST00000444621 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
HLA-F-221ENST00000444621 MS4A1P11836 297 aa13.81□□□□□ -0.2
HLA-F-221ENST00000444621 GTF2IP78347 998 aa13.81□□□□□ -0.2
HLA-F-221ENST00000444621 FBXO46Q6PJ61 603 aaPredicted RBP13.81□□□□□ -0.2
HLA-F-221ENST00000444621 ANKRD44Q8N8A2 993 aa13.81□□□□□ -0.2
HLA-F-221ENST00000444621 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
HLA-F-221ENST00000444621 MKI67P46013 3256 aaKnown RBP13.81□□□□□ -0.2
HLA-F-221ENST00000444621 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
HLA-F-221ENST00000444621 GPR25O00155 361 aa13.8□□□□□ -0.2
HLA-F-221ENST00000444621 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
HLA-F-221ENST00000444621 HIBADHP31937 336 aaKnown RBP13.8□□□□□ -0.2
HLA-F-221ENST00000444621 ANGEL2Q5VTE6 544 aaKnown RBP13.8□□□□□ -0.2
HLA-F-221ENST00000444621 MOB2Q70IA6 237 aa13.8□□□□□ -0.2
HLA-F-221ENST00000444621 TXNRD3Q86VQ6 643 aa13.8□□□□□ -0.2
HLA-F-221ENST00000444621 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
HLA-F-221ENST00000444621 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
HLA-F-221ENST00000444621 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
HLA-F-221ENST00000444621 PSME4Q14997 1843 aa13.8□□□□□ -0.2
HLA-F-221ENST00000444621 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 PDE8BO95263 885 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 TRIM27P14373 513 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 IL1R1P14778 569 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
HLA-F-221ENST00000444621 FKBP1BP68106 108 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 SCARF1Q14162 830 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 DACT2Q5SW24 774 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 PUS3Q9BZE2 481 aaKnown RBP13.79□□□□□ -0.2
HLA-F-221ENST00000444621 ZNF609O15014 1411 aa13.79□□□□□ -0.2
HLA-F-221ENST00000444621 EYA2O00167 538 aa13.78□□□□□ -0.2
HLA-F-221ENST00000444621 SASH1O94885 1247 aa13.78□□□□□ -0.2
HLA-F-221ENST00000444621 GNAI2P04899 355 aa13.78□□□□□ -0.2
HLA-F-221ENST00000444621 SLC5A1P13866 664 aa13.78□□□□□ -0.2
HLA-F-221ENST00000444621 LRRC24Q50LG9 513 aa13.78□□□□□ -0.2
HLA-F-221ENST00000444621 CEP126Q9P2H0 1117 aa13.78□□□□□ -0.2
HLA-F-221ENST00000444621 SCAF8Q9UPN6 1271 aaKnown RBP13.78□□□□□ -0.2
HLA-F-221ENST00000444621 MYO1BO43795 1136 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 KLRK1P26718 216 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 TM4SF4P48230 202 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 FKBP1AP62942 108 aaKnown RBP13.77□□□□□ -0.21
HLA-F-221ENST00000444621 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.21
HLA-F-221ENST00000444621 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.21
HLA-F-221ENST00000444621 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 DZIP1LQ8IYY4 767 aaKnown RBP13.77□□□□□ -0.21
HLA-F-221ENST00000444621 KLHDC4Q8TBB5 520 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 GMLQ99445 158 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 MEIS3Q99687 375 aa13.77□□□□□ -0.21
HLA-F-221ENST00000444621 SNAP23O00161 211 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 FKTNO75072 461 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 CIAO1O76071 339 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 IL15P40933 162 aaPredicted RBP13.76□□□□□ -0.21
HLA-F-221ENST00000444621 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
HLA-F-221ENST00000444621 MKRN3Q13064 507 aaKnown RBP13.76□□□□□ -0.21
HLA-F-221ENST00000444621 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 LPIN2Q92539 896 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 SIL1Q9H173 461 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 R3HDMLQ9H3Y0 253 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 GNL3LQ9NVN8 582 aaKnown RBP13.76□□□□□ -0.21
HLA-F-221ENST00000444621 A0A1B0GUL6 1792 aa13.76□□□□□ -0.21
HLA-F-221ENST00000444621 PITPNM2Q9BZ72 1349 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 NF2P35240 595 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 GYG1P46976 350 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
HLA-F-221ENST00000444621 DLGAP5Q15398 846 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 ITPRIPQ8IWB1 547 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 TBC1D22AQ8WUA7 517 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 FAM84BQ96KN1 310 aaPredicted RBP13.75□□□□□ -0.21
HLA-F-221ENST00000444621 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
HLA-F-221ENST00000444621 AKAP2Q9Y2D5 859 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 HTTP42858 3142 aa13.75□□□□□ -0.21
HLA-F-221ENST00000444621 RBBP6Q7Z6E9 1792 aaKnown RBP13.75□□□□□ -0.21
HLA-F-221ENST00000444621 CENPFP49454 3210 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms