RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 IFIT1P09914 478 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-212ENST00000443561 TNNI3KQ59H18 835 aa15.92■□□□□ 0.14
PDLIM2-212ENST00000443561 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
PDLIM2-212ENST00000443561 ADARB2Q9NS39 739 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-212ENST00000443561 FPGT-TNNI3KV9GXZ4 949 aa15.92■□□□□ 0.14
PDLIM2-212ENST00000443561 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 ZBTB22O15209 634 aa15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 FMR1Q06787 632 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 G3BP1Q13283 466 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 SCARF1Q14162 830 aa15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 TBC1D10BQ4KMP7 808 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 EAPPQ56P03 285 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 CCDC102BQ68D86 513 aa15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 EAF2Q96CJ1 260 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 XAGE2Q96GT9 111 aa15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 ZBED3Q96IU2 234 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-212ENST00000443561 ITGBL1O95965 494 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 LMOD1P29536 600 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 FKBP1AP62942 108 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 PI16Q6UXB8 463 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 DLK2Q6UY11 383 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 EXOC6Q8TAG9 804 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 DBNDD2Q9BQY9 259 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 PGAP2Q9UHJ9 254 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 DBNLQ9UJU6 430 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
PDLIM2-212ENST00000443561 RASGRF1Q13972 1273 aa15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 MAP1SQ66K74 1059 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 USP50Q70EL3 339 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 KIAA0825Q8IV33 1275 aa15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 MYH2Q9UKX2 1941 aa15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 PASKQ96RG2 1323 aa15.89■□□□□ 0.13
PDLIM2-212ENST00000443561 USP17L8P0C7I0 530 aa15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 CHAF1AQ13111 956 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 KIF4BQ2VIQ3 1234 aa15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 RHPN1Q8TCX5 695 aa15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 IL1RAPL2Q9NP60 686 aa15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 CEP350Q5VT06 3117 aa15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 MYO3BQ8WXR4 1341 aa15.88■□□□□ 0.13
PDLIM2-212ENST00000443561 ARID4AP29374 1257 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 IRX6P78412 446 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 FSTL1Q12841 308 aa15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 CAVIN4Q5BKX8 364 aa15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 MFSD14BQ5SR56 506 aa15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 PNMA8AQ86V59 439 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 MYOZ2Q9NPC6 264 aa15.87■□□□□ 0.13
PDLIM2-212ENST00000443561 F8W031 263 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 MCAMP43121 646 aa15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 NBPF9Q3BBW0 867 aa15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 RBM26Q5T8P6 1007 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 C16orf71Q8IYS4 520 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 ZNF384Q8TF68 577 aa15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 CCDC8Q9H0W5 538 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 SCAF8Q9UPN6 1271 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 AKAP2Q9Y2D5 859 aa15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 CDK5RAP2Q96SN8 1893 aa15.86■□□□□ 0.13
PDLIM2-212ENST00000443561 H7C1D1 291 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 TRAF5O00463 557 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 WNT10BO00744 389 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 PRDX5P30044 214 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 NEUROD6Q96NK8 337 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 GLIS2Q9BZE0 524 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 PAPPA2Q9BXP8 1791 aa15.85■□□□□ 0.13
PDLIM2-212ENST00000443561 APBB1O00213 710 aa15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 HMMRO75330 724 aa15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 HTRA3P83110 453 aa15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 VPS37DQ86XT2 251 aa15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 GGA3Q9NZ52 723 aa15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 PDS5AQ29RF7 1337 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 SALL1Q9NSC2 1324 aa15.84■□□□□ 0.13
PDLIM2-212ENST00000443561 ADM5C9JUS6 153 aa15.83■□□□□ 0.12
PDLIM2-212ENST00000443561 CNTROBQ8N137 903 aa15.83■□□□□ 0.12
PDLIM2-212ENST00000443561 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.12
PDLIM2-212ENST00000443561 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.12
PDLIM2-212ENST00000443561 SEMA3EO15041 775 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 HSPA6P17066 643 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 CFAP100Q494V2 611 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 ANGEL2Q5VTE6 544 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 AACSQ86V21 672 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 ERC1Q8IUD2 1116 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 PRMT6Q96LA8 375 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 TTF2Q9UNY4 1162 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 NDUFB9Q9Y6M9 179 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 SSC5DA1L4H1 1573 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 MYH7P12883 1935 aa15.82■□□□□ 0.12
PDLIM2-212ENST00000443561 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
PDLIM2-212ENST00000443561 RAB11FIP3O75154 756 aa15.81■□□□□ 0.12
PDLIM2-212ENST00000443561 IGHDP01880 384 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms