RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
USP1-203ENST00000442679 ADARB2Q9NS39 739 aaKnown RBP15.19■□□□□ 0.02
USP1-203ENST00000442679 FPGT-TNNI3KV9GXZ4 949 aa15.19■□□□□ 0.02
USP1-203ENST00000442679 MYO3BQ8WXR4 1341 aa15.18■□□□□ 0.02
USP1-203ENST00000442679 TOMM70O94826 608 aa15.18■□□□□ 0.02
USP1-203ENST00000442679 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
USP1-203ENST00000442679 PHKA1P46020 1223 aa15.18■□□□□ 0.02
USP1-203ENST00000442679 CHAF1AQ13111 956 aaPredicted RBP15.18■□□□□ 0.02
USP1-203ENST00000442679 CCDC102BQ68D86 513 aa15.18■□□□□ 0.02
USP1-203ENST00000442679 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
USP1-203ENST00000442679 USP50Q70EL3 339 aaPredicted RBP15.17■□□□□ 0.02
USP1-203ENST00000442679 CERS5Q8N5B7 392 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 RBM46Q8TBY0 533 aaKnown RBP15.17■□□□□ 0.02
USP1-203ENST00000442679 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 DCTPP1Q9H773 170 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 ZNF609O15014 1411 aa15.17■□□□□ 0.02
USP1-203ENST00000442679 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
USP1-203ENST00000442679 TBC1D10BQ4KMP7 808 aaPredicted RBP15.16■□□□□ 0.02
USP1-203ENST00000442679 MFSD14BQ5SR56 506 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 RBM26Q5T8P6 1007 aaKnown RBP15.16■□□□□ 0.02
USP1-203ENST00000442679 SAMD7Q7Z3H4 446 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 KIAA0825Q8IV33 1275 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
USP1-203ENST00000442679 DBNDD2Q9BQY9 259 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
USP1-203ENST00000442679 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
USP1-203ENST00000442679 SCN4AP35499 1836 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 SEMA3EO15041 775 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 AACSQ86V21 672 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
USP1-203ENST00000442679 TRPM4Q8TD43 1214 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
USP1-203ENST00000442679 F8W031 263 aaPredicted RBP15.14■□□□□ 0.01
USP1-203ENST00000442679 EGFRP00533 1210 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 MMP14P50281 582 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 HIRAP54198 1017 aaPredicted RBP15.14■□□□□ 0.01
USP1-203ENST00000442679 CCDC158Q5M9N0 1113 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 SMC1BQ8NDV3 1235 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 WDR66Q8TBY9 1149 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 MYOZ2Q9NPC6 264 aa15.14■□□□□ 0.01
USP1-203ENST00000442679 DBNLQ9UJU6 430 aaKnown RBP15.14■□□□□ 0.01
USP1-203ENST00000442679 ZBTB22O15209 634 aa15.13■□□□□ 0.01
USP1-203ENST00000442679 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
USP1-203ENST00000442679 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
USP1-203ENST00000442679 UQCRFS1P1P0C7P4 283 aa15.13■□□□□ 0.01
USP1-203ENST00000442679 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
USP1-203ENST00000442679 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
USP1-203ENST00000442679 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
USP1-203ENST00000442679 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
USP1-203ENST00000442679 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
USP1-203ENST00000442679 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
USP1-203ENST00000442679 C1QTNF8P60827 252 aa15.12■□□□□ 0.01
USP1-203ENST00000442679 FSTL1Q12841 308 aa15.12■□□□□ 0.01
USP1-203ENST00000442679 GRIK5Q16478 980 aa15.12■□□□□ 0.01
USP1-203ENST00000442679 KIF4BQ2VIQ3 1234 aa15.12■□□□□ 0.01
USP1-203ENST00000442679 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
USP1-203ENST00000442679 HMG20BQ9P0W2 317 aa15.12■□□□□ 0.01
USP1-203ENST00000442679 TTF2Q9UNY4 1162 aaKnown RBP15.12■□□□□ 0.01
USP1-203ENST00000442679 PSME4Q14997 1843 aa15.11■□□□□ 0.01
USP1-203ENST00000442679 SCARF1Q14162 830 aa15.11■□□□□ 0.01
USP1-203ENST00000442679 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
USP1-203ENST00000442679 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
USP1-203ENST00000442679 SPATA5Q8NB90 893 aa15.11■□□□□ 0.01
USP1-203ENST00000442679 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
USP1-203ENST00000442679 PGAP2Q9UHJ9 254 aa15.11■□□□□ 0.01
USP1-203ENST00000442679 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
USP1-203ENST00000442679 PDS5AQ29RF7 1337 aaKnown RBP15.11■□□□□ 0.01
USP1-203ENST00000442679 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
USP1-203ENST00000442679 MCAMP43121 646 aa15.1■□□□□ 0.01
USP1-203ENST00000442679 DLGAP5Q15398 846 aa15.1■□□□□ 0.01
USP1-203ENST00000442679 ZNF512BQ96KM6 892 aaPredicted RBP15.1■□□□□ 0.01
USP1-203ENST00000442679 SNRKQ9NRH2 765 aa15.1■□□□□ 0.01
USP1-203ENST00000442679 SUGT1Q9Y2Z0 365 aa15.1■□□□□ 0.01
USP1-203ENST00000442679 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
USP1-203ENST00000442679 ZNF646O15015 1829 aaPredicted RBP15.09■□□□□ 0.01
USP1-203ENST00000442679 LDHBP07195 334 aaKnown RBP15.09■□□□□ 0.01
USP1-203ENST00000442679 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP1-203ENST00000442679 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 CFAP100Q494V2 611 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 PI16Q6UXB8 463 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 CNTROBQ8N137 903 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 ZGPATQ8N5A5 531 aaKnown RBP15.09■□□□□ 0.01
USP1-203ENST00000442679 GCC1Q96CN9 775 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 SERPINA10Q9UK55 444 aa15.09■□□□□ 0.01
USP1-203ENST00000442679 WNT10BO00744 389 aa15.08■□□□□ 0
USP1-203ENST00000442679 IGHDP01880 384 aa15.08■□□□□ 0
USP1-203ENST00000442679 ANKRD45Q5TZF3 282 aa15.08■□□□□ 0
USP1-203ENST00000442679 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms