RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 MUM1Q2TAK8 710 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 RRAGBQ5VZM2 374 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 CYP26C1Q6V0L0 522 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 SMIM23A6NLE4 172 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 CASP8Q14790 479 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 PIK3R5Q8WYR1 880 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 SPDL1Q96EA4 605 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 ZHX3Q9H4I2 956 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 ST7Q9NRC1 585 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
LIN54-202ENST00000442461 STAMBPO95630 424 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 NLRP12P59046 1061 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 TEX11Q8IYF3 940 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 TSG101Q99816 390 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 NSFL1CQ9UNZ2 370 aaKnown RBP11.63□□□□□ -0.55
LIN54-202ENST00000442461 STK38LQ9Y2H1 464 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
LIN54-202ENST00000442461 RHPN1Q8TCX5 695 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 TCP11Q8WWU5 503 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 NACAP1Q9BZK3 213 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 TSGA10Q9BZW7 698 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 RMND1Q9NWS8 449 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 RASAL2Q9UJF2 1139 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 PTPN23Q9H3S7 1636 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 TRIM14Q14142 442 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.62□□□□□ -0.55
LIN54-202ENST00000442461 POLE2P56282 527 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 STX17P56962 302 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 APBA1Q02410 837 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
LIN54-202ENST00000442461 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
LIN54-202ENST00000442461 LARSQ9P2J5 1176 aaKnown RBP11.62□□□□□ -0.55
LIN54-202ENST00000442461 MACROD2A1Z1Q3 448 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 KCNK9Q9NPC2 374 aa11.62□□□□□ -0.55
LIN54-202ENST00000442461 AFMP43652 599 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 DIXDC1Q155Q3 683 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 CEP85Q6P2H3 762 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 CCDC8Q9H0W5 538 aaPredicted RBP11.61□□□□□ -0.55
LIN54-202ENST00000442461 CPA1P15085 419 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 RANBP1P43487 201 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
LIN54-202ENST00000442461 UBXN1Q04323 297 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 Q6ZUG5 572 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 BRAPQ7Z569 592 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 CROCCP2Q86T23 111 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 TTC6Q86TZ1 520 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 DDX12PQ92771 950 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 YIPF3Q9GZM5 350 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 CREB3O43889 395 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 NR1I2O75469 434 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 NBPF9Q3BBW0 867 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 TTC19Q6DKK2 380 aaPredicted RBP11.61□□□□□ -0.55
LIN54-202ENST00000442461 HOOK3Q86VS8 718 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 ZMAT2Q96NC0 199 aaKnown RBP11.61□□□□□ -0.55
LIN54-202ENST00000442461 DESI2Q9BSY9 194 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 NKIRAS1Q9NYS0 192 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
LIN54-202ENST00000442461 STX10O60499 249 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 PPFIA2O75334 1257 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 RFC1P35251 1148 aaPredicted RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 HIBCHQ6NVY1 386 aaPredicted RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 PHLDB2Q86SQ0 1253 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 MTRF1LQ9UGC7 380 aaKnown RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 PSME1Q06323 249 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 ZBTB17Q13105 803 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 CAPRIN2Q6IMN6 1127 aaKnown RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 RAB3IL1Q8TBN0 382 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 ARHGEF2Q92974 986 aaKnown RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 LRRC2Q9BYS8 371 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 NFE2L3Q9Y4A8 694 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 PSMD2Q13200 908 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 PDCD2Q16342 344 aaPredicted RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 KRT71Q3SY84 523 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 CCDC43Q96MW1 224 aaKnown RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.6□□□□□ -0.55
LIN54-202ENST00000442461 MTMR6Q9Y217 621 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 CREB3L3Q68CJ9 461 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 CCHCR1Q8TD31 782 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 OTUD7AQ8TE49 926 aaPredicted RBP11.6□□□□□ -0.55
LIN54-202ENST00000442461 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
LIN54-202ENST00000442461 PTPDC1A2A3K4 754 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 PSMA7O14818 248 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 KRT9P35527 623 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 RASSF2P50749 326 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 ADKP55263 362 aaKnown RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 RWDD2BP57060 319 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 CDC37L1Q7L3B6 337 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms