RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
CCDC39-201ENST00000442201 HSCBQ8IWL3 235 aa9.67□□□□□ -0.86
CCDC39-201ENST00000442201 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
CCDC39-201ENST00000442201 MASTLQ96GX5 879 aa9.67□□□□□ -0.86
CCDC39-201ENST00000442201 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
CCDC39-201ENST00000442201 IQSEC3Q9UPP2 1182 aaPredicted RBP9.67□□□□□ -0.86
CCDC39-201ENST00000442201 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
CCDC39-201ENST00000442201 SEMA3EO15041 775 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 TERF1P54274 439 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 MAP3K12Q12852 859 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 HOMEZQ8IX15 550 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 APPBP2Q92624 585 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 SNX21Q969T3 373 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 PDGFDQ9GZP0 370 aaPredicted RBP9.66□□□□□ -0.86
CCDC39-201ENST00000442201 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 PALD1Q9ULE6 856 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 TAF1P21675 1872 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 NRXN2Q9P2S2 1712 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 H0YIN7 160 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 ATP2B4P23634 1241 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 KLRK1P26718 216 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 GPSM2P81274 684 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 SP8Q8IXZ3 490 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 RBM8AQ9Y5S9 174 aaKnown RBP9.66□□□□□ -0.86
CCDC39-201ENST00000442201 ARAP2Q8WZ64 1704 aa9.66□□□□□ -0.86
CCDC39-201ENST00000442201 ADD2P35612 726 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 DMTNQ08495 405 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 CCDC129Q6ZRS4 1044 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 C2CD5Q86YS7 1000 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 TMX4Q9H1E5 349 aaPredicted RBP9.65□□□□□ -0.86
CCDC39-201ENST00000442201 GGA1Q9UJY5 639 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 MAST3O60307 1309 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 UFL1O94874 794 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 ZKSCAN1P17029 563 aaPredicted RBP9.65□□□□□ -0.86
CCDC39-201ENST00000442201 UBE3CQ15386 1083 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 OSBP2Q969R2 916 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 ZNF622Q969S3 477 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC39-201ENST00000442201 IL17RAQ96F46 866 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 ATP6V0A2Q9Y487 856 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 CASZ1Q86V15 1759 aa9.65□□□□□ -0.86
CCDC39-201ENST00000442201 ST18O60284 1047 aa9.65□□□□□ -0.87
CCDC39-201ENST00000442201 PDE6AP16499 860 aa9.65□□□□□ -0.87
CCDC39-201ENST00000442201 NECTIN1Q15223 517 aa9.65□□□□□ -0.87
CCDC39-201ENST00000442201 PRPF40BQ6NWY9 871 aaKnown RBP9.65□□□□□ -0.87
CCDC39-201ENST00000442201 SAMD1Q6SPF0 538 aaPredicted RBP9.65□□□□□ -0.87
CCDC39-201ENST00000442201 C15orf52Q6ZUT6 534 aaKnown RBP9.65□□□□□ -0.87
CCDC39-201ENST00000442201 SLC51AQ86UW1 340 aa9.65□□□□□ -0.87
CCDC39-201ENST00000442201 DHX37Q8IY37 1157 aaKnown RBP9.65□□□□□ -0.87
CCDC39-201ENST00000442201 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.87
CCDC39-201ENST00000442201 TXNRD3Q86VQ6 643 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 SNX14Q9Y5W7 946 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 U3KPZ7 1027 aaPredicted RBP9.64□□□□□ -0.87
CCDC39-201ENST00000442201 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 STYK1Q6J9G0 422 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 ZNF804AQ7Z570 1209 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
CCDC39-201ENST00000442201 ABCF2Q9UG63 623 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 WWC3Q9ULE0 1092 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 PDS5AQ29RF7 1337 aaKnown RBP9.64□□□□□ -0.87
CCDC39-201ENST00000442201 ZNF532Q9HCE3 1301 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 IRS2Q9Y4H2 1338 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 M0R2C6 588 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 ZBTB22O15209 634 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 NEK4P51957 841 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 RASEFQ8IZ41 740 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 DSCC1Q9BVC3 393 aa9.64□□□□□ -0.87
CCDC39-201ENST00000442201 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC39-201ENST00000442201 C6orf229H3BNL8 230 aa9.63□□□□□ -0.87
CCDC39-201ENST00000442201 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
CCDC39-201ENST00000442201 TBC1D16Q8TBP0 767 aa9.63□□□□□ -0.87
CCDC39-201ENST00000442201 KCNB2Q92953 911 aa9.63□□□□□ -0.87
CCDC39-201ENST00000442201 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
CCDC39-201ENST00000442201 FSD2A1L4K1 749 aa9.63□□□□□ -0.87
CCDC39-201ENST00000442201 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
CCDC39-201ENST00000442201 SLC27A2O14975 620 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 GPAA1O43292 621 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 HSPD1P10809 573 aaKnown RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 CHAF1AQ13111 956 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 MPNDQ8N594 471 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 GPR101Q96P66 508 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 POLLQ9UGP5 575 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 AKAP11Q9UKA4 1901 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 ANKRD31Q8N7Z5 1873 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 TCRBV5S4A2TA0A5A2 114 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 CHRNA5P30532 468 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 VPS53Q5VIR6 699 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 TDRD7Q8NHU6 1098 aaKnown RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 UPF3BQ9BZI7 483 aaKnown RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 A0A1B0GUL6 1792 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 COL1A1P02452 1464 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 DPP8Q6V1X1 898 aaPredicted RBP9.62□□□□□ -0.87
CCDC39-201ENST00000442201 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms