RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PIH1D3Q9NQM4 214 aaKnown RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 ZNF532Q9HCE3 1301 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 TAF1LQ8IZX4 1826 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 CYP2E1P05181 493 aaPredicted RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 RASGRF1Q13972 1273 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 CSPP1Q1MSJ5 1256 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 DHX32Q7L7V1 743 aaKnown RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 ZNF804AQ7Z570 1209 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 CELF1Q92879 486 aaKnown RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 TNPO1Q92973 898 aaKnown RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 OSBP2Q969R2 916 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 SEC62Q99442 399 aaKnown RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 NOL10Q9BSC4 688 aaKnown RBP7.14□□□□□ -1.27
VPS50-205ENST00000441602 STK32BQ9NY57 414 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 ANKIB1Q9P2G1 1089 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 PARP3Q9Y6F1 533 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 XDHP47989 1333 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 M0R2C6 588 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 ZBTB22O15209 634 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 BCAMP50895 628 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 PRR5LQ6MZQ0 368 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 ZNF804BA4D1E1 1349 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 ARAP2Q8WZ64 1704 aa7.14□□□□□ -1.27
VPS50-205ENST00000441602 ALX1Q15699 326 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 MAGEB6Q8N7X4 407 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 NCOA7Q8NI08 942 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 CRAMP1Q96RY5 1269 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 NAPBQ9H115 298 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 CYP7A1P22680 504 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 GSTO1P78417 241 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 RNF41Q9H4P4 317 aaPredicted RBP7.13□□□□□ -1.27
VPS50-205ENST00000441602 ABCF2Q9UG63 623 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 ZMYM6O95789 1325 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 WDR19Q8NEZ3 1342 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 LDHCP07864 332 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 CYP21A2P08686 494 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 TM4SF1P30408 202 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 MCM5P33992 734 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 PDE6BP35913 854 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 ADCK5Q3MIX3 580 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 C3orf67Q6ZVT6 689 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 FBXO33Q7Z6M2 555 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 CERS3Q8IU89 383 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 CCDC83Q8IWF9 413 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 CNNM2Q9H8M5 875 aa7.13□□□□□ -1.27
VPS50-205ENST00000441602 DHX16O60231 1041 aaKnown RBP7.12□□□□□ -1.27
VPS50-205ENST00000441602 MBD4O95243 580 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 TDO2P48775 406 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 NAA16Q6N069 864 aaPredicted RBP7.12□□□□□ -1.27
VPS50-205ENST00000441602 CPLX2Q6PUV4 134 aaKnown RBP7.12□□□□□ -1.27
VPS50-205ENST00000441602 PI16Q6UXB8 463 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 SMIM5Q71RC9 77 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 GGA1Q9UJY5 639 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 MAGEB6P1A0A0J9YX57 407 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 PATL2C9JE40 543 aaKnown RBP7.12□□□□□ -1.27
VPS50-205ENST00000441602 E7EWF7 191 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 GYG1P46976 350 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
VPS50-205ENST00000441602 CLEC17AQ6ZS10 378 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 SLF2Q8IX21 1173 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 FBXO41Q8TF61 875 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 BRIP1Q9BX63 1249 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 NAP1L2Q9ULW6 460 aaPredicted RBP7.12□□□□□ -1.27
VPS50-205ENST00000441602 PNPLA7Q6ZV29 1317 aa7.12□□□□□ -1.27
VPS50-205ENST00000441602 SLC3A2P08195 630 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 ALDH1B1P30837 517 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 HOXA10P31260 410 aaPredicted RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 BAG6P46379 1132 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 CHAF1AQ13111 956 aaPredicted RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 SART3Q15020 963 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 Q6ZUG5 572 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 C15orf52Q6ZUT6 534 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 AMOTL1Q8IY63 956 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 FAM184AQ8NB25 1140 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 LLPHQ9BRT6 129 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 KRT23Q9C075 422 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 WWC3Q9ULE0 1092 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 BRWD3Q6RI45 1802 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 BAG4O95429 457 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 C4AP0C0L4 1744 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 CPA1P15085 419 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 NPR1P16066 1061 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 SYNE3Q6ZMZ3 975 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 DZIP1Q86YF9 867 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 CCDC24Q8N4L8 307 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 AKT1S1Q96B36 256 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 FAM84BQ96KN1 310 aaPredicted RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 CRNKL1Q9BZJ0 848 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 PUS7LQ9H0K6 701 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 SLC4A4Q9Y6R1 1079 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 POLRMTO00411 1230 aaKnown RBP7.11□□□□□ -1.27
VPS50-205ENST00000441602 BRD1O95696 1058 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 FGAP02671 866 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 NT5C2P49902 561 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 CRY2Q49AN0 593 aa7.11□□□□□ -1.27
VPS50-205ENST00000441602 ERICH2A1L162 156 aa7.1□□□□□ -1.27
VPS50-205ENST00000441602 G3V3G9 751 aa7.1□□□□□ -1.27
VPS50-205ENST00000441602 TRAK2O60296 914 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms