RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 PA2G4Q9UQ80 394 aaKnown RBP13.87□□□□□ -0.19
LTBR-203ENST00000441074 PSDA5PKW4 1024 aaPredicted RBP13.86□□□□□ -0.19
LTBR-203ENST00000441074 SLC27A2O14975 620 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 BLOC1S2Q6QNY1 142 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 CFAP45Q9UL16 551 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 MRC1P22897 1456 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 ZRANB2O95218 330 aaKnown RBP eCLIP13.86□□□□□ -0.19
LTBR-203ENST00000441074 DDX58O95786 925 aaKnown RBP13.86□□□□□ -0.19
LTBR-203ENST00000441074 KCNJ6P48051 423 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 TPM4P67936 248 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 SUCLG2Q96I99 432 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 ANO10Q9NW15 660 aa13.86□□□□□ -0.19
LTBR-203ENST00000441074 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
LTBR-203ENST00000441074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.86□□□□□ -0.19
LTBR-203ENST00000441074 C5P01031 1676 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 RPS6KB1P23443 525 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
LTBR-203ENST00000441074 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 ZSCAN16Q9H4T2 348 aaPredicted RBP13.85□□□□□ -0.19
LTBR-203ENST00000441074 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 TOB2Q14106 344 aaPredicted RBP13.85□□□□□ -0.19
LTBR-203ENST00000441074 ARHGAP29Q52LW3 1261 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 EPHA10Q5JZY3 1008 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 TXLNBQ8N3L3 684 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 PPP1R13BQ96KQ4 1090 aa13.85□□□□□ -0.19
LTBR-203ENST00000441074 BICC1Q9H694 974 aaKnown RBP13.85□□□□□ -0.19
LTBR-203ENST00000441074 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
LTBR-203ENST00000441074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.85□□□□□ -0.19
LTBR-203ENST00000441074 GRM8O00222 908 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 DHX8Q14562 1220 aaKnown RBP13.84□□□□□ -0.19
LTBR-203ENST00000441074 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 MARCH10Q8NA82 808 aaPredicted RBP13.84□□□□□ -0.19
LTBR-203ENST00000441074 THSD7AQ9UPZ6 1657 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 KCNQ2O43526 872 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 RAD51AP2Q09MP3 1159 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 SYT10Q6XYQ8 523 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 KRT27Q7Z3Y8 459 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 CCDC150Q8NCX0 1101 aa13.84□□□□□ -0.19
LTBR-203ENST00000441074 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.19
LTBR-203ENST00000441074 KCNQ4P56696 695 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 GCKRQ14397 625 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 AACSQ86V21 672 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
LTBR-203ENST00000441074 CEP57L1Q8IYX8 460 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 LRRN4CLQ8ND94 238 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
LTBR-203ENST00000441074 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 PARP4Q9UKK3 1724 aaKnown RBP13.83□□□□□ -0.2
LTBR-203ENST00000441074 UTYO14607 1347 aa13.83□□□□□ -0.2
LTBR-203ENST00000441074 COL9A3Q14050 684 aaPredicted RBP13.82□□□□□ -0.2
LTBR-203ENST00000441074 PTF1AQ7RTS3 328 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
LTBR-203ENST00000441074 SIL1Q9H173 461 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 HMG20BQ9P0W2 317 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 ORC3Q9UBD5 711 aaPredicted RBP13.82□□□□□ -0.2
LTBR-203ENST00000441074 TNS2Q63HR2 1409 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 UBXN4Q92575 508 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 BRF1Q92994 677 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 TRERF1Q96PN7 1200 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
LTBR-203ENST00000441074 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 TPM1P09493 284 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 NMIQ13287 307 aaPredicted RBP13.81□□□□□ -0.2
LTBR-203ENST00000441074 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 AOPEPQ8N6M6 819 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 SRRTQ9BXP5 876 aaKnown RBP13.81□□□□□ -0.2
LTBR-203ENST00000441074 BRWD3Q6RI45 1802 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 H3BQV1 296 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 NRDCO43847 1150 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
LTBR-203ENST00000441074 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
LTBR-203ENST00000441074 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
LTBR-203ENST00000441074 STK3Q13188 491 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 TCEANC2Q96MN5 208 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 GOLPH3LQ9H4A5 285 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
LTBR-203ENST00000441074 PHLPP2Q6ZVD8 1323 aa13.8□□□□□ -0.2
LTBR-203ENST00000441074 A0A087WZG4 1122 aa13.8□□□□□ -0.2
LTBR-203ENST00000441074 CCP110O43303 1012 aa13.8□□□□□ -0.2
LTBR-203ENST00000441074 JAK2O60674 1132 aa13.8□□□□□ -0.2
LTBR-203ENST00000441074 ETF1P62495 437 aaKnown RBP13.8□□□□□ -0.2
LTBR-203ENST00000441074 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms