RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 MON2Q7Z3U7 1717 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 FANCGO15287 622 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 CUTAO60888 179 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 MCM3P25205 808 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 ME1P48163 572 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 UBASH3AP57075 661 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 NCAPHQ15003 741 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 EPC1Q9H2F5 836 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 SBNO1A3KN83 1393 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 RGPD1P0DJD0 1748 aa15.78■□□□□ 0.12
LINC02048-201ENST00000440556 AARSP49588 968 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC02048-201ENST00000440556 SF3B2Q13435 895 aaKnown RBP15.77■□□□□ 0.12
LINC02048-201ENST00000440556 FOXR1Q6PIV2 292 aa15.77■□□□□ 0.12
LINC02048-201ENST00000440556 AFAP1L1Q8TED9 768 aa15.77■□□□□ 0.12
LINC02048-201ENST00000440556 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.12
LINC02048-201ENST00000440556 SLC3A2P08195 630 aaKnown RBP15.77■□□□□ 0.11
LINC02048-201ENST00000440556 DPCR1Q3MIW9 517 aa15.77■□□□□ 0.11
LINC02048-201ENST00000440556 TTLL5Q6EMB2 1281 aa15.77■□□□□ 0.11
LINC02048-201ENST00000440556 BAG1Q99933 345 aaPredicted RBP15.77■□□□□ 0.11
LINC02048-201ENST00000440556 ANKZF1Q9H8Y5 726 aa15.77■□□□□ 0.11
LINC02048-201ENST00000440556 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.11
LINC02048-201ENST00000440556 CDC23Q9UJX2 597 aa15.77■□□□□ 0.11
LINC02048-201ENST00000440556 A2ML1A8K2U0 1454 aa15.77■□□□□ 0.11
LINC02048-201ENST00000440556 FBLN1P23142 703 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 TDO2P48775 406 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 HDGFP51858 240 aaKnown RBP15.76■□□□□ 0.11
LINC02048-201ENST00000440556 MNAT1P51948 309 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 CASP8Q14790 479 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 E2F4Q16254 413 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 SULT6B1Q6IMI4 303 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 TMEM139Q8IV31 216 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 DHX58Q96C10 678 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 WDR24Q96S15 920 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
LINC02048-201ENST00000440556 ATXN2Q99700 1313 aaKnown RBP15.76■□□□□ 0.11
LINC02048-201ENST00000440556 CEP170BQ9Y4F5 1589 aaPredicted RBP15.76■□□□□ 0.11
LINC02048-201ENST00000440556 NUTM2FA1L443 756 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 SERPINC1P01008 464 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 NUTM2GQ5VZR2 741 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 KCNG4Q8TDN1 519 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 CCDC12Q8WUD4 166 aaPredicted RBP15.75■□□□□ 0.11
LINC02048-201ENST00000440556 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 USP28Q96RU2 1077 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 TECPR2O15040 1411 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 A6NNZ2 444 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 PIP4K2BP78356 416 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 MYL5Q02045 173 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 TBX2Q13207 712 aaPredicted RBP15.75■□□□□ 0.11
LINC02048-201ENST00000440556 TUBB8Q3ZCM7 444 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 ABCB6Q9NP58 842 aa15.75■□□□□ 0.11
LINC02048-201ENST00000440556 C21orf2O43822 256 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 JAK2O60674 1132 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 PFKFB2O60825 505 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 SHOX2O60902 331 aaPredicted RBP15.74■□□□□ 0.11
LINC02048-201ENST00000440556 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
LINC02048-201ENST00000440556 HNRNPH1P31943 449 aaKnown RBP15.74■□□□□ 0.11
LINC02048-201ENST00000440556 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
LINC02048-201ENST00000440556 DDR1Q08345 913 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 STK3Q13188 491 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 WDR93Q6P2C0 686 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 BICC1Q9H694 974 aaKnown RBP15.74■□□□□ 0.11
LINC02048-201ENST00000440556 FAM204AQ9H8W3 233 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 PCDHA7Q9UN72 937 aa15.74■□□□□ 0.11
LINC02048-201ENST00000440556 AKAP12Q02952 1782 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 EBAG9O00559 213 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 YEATS4O95619 227 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
LINC02048-201ENST00000440556 NMIQ13287 307 aaPredicted RBP15.73■□□□□ 0.11
LINC02048-201ENST00000440556 WHAMMP3Q1A5X7 153 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 CFAP100Q494V2 611 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 MAP9Q49MG5 647 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 SPATS2Q86XZ4 545 aaKnown RBP15.73■□□□□ 0.11
LINC02048-201ENST00000440556 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
LINC02048-201ENST00000440556 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 CPS1P31327 1500 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
LINC02048-201ENST00000440556 DTNBO60941 627 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 CCDC175P0C221 793 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 MTX1Q13505 466 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 EIF4A2Q14240 407 aaKnown RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 CNPY4Q8N129 248 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 NEK1Q96PY6 1258 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 NAA15Q9BXJ9 866 aaKnown RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 TMCO5BA8MYB1 307 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 KIF3CO14782 793 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 KIF5CO60282 957 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 HSP90B1P14625 803 aaKnown RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 LMOD1P29536 600 aaPredicted RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 KIF4BQ2VIQ3 1234 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 NME9Q86XW9 330 aa15.72■□□□□ 0.11
LINC02048-201ENST00000440556 FAM177A1Q8N128 213 aaPredicted RBP15.72■□□□□ 0.11
LINC02048-201ENST00000440556 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
LINC02048-201ENST00000440556 SF3A1Q15459 793 aaKnown RBP15.71■□□□□ 0.11
LINC02048-201ENST00000440556 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
LINC02048-201ENST00000440556 OLFM4Q6UX06 510 aa15.71■□□□□ 0.11
LINC02048-201ENST00000440556 ARHGEF25Q86VW2 580 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms