RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 VEGFBP49765 207 aa17.12■□□□□ 0.33
LTBR-202ENST00000440421 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
LTBR-202ENST00000440421 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
LTBR-202ENST00000440421 PAXIP1Q6ZW49 1069 aaPredicted RBP17.12■□□□□ 0.33
LTBR-202ENST00000440421 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
LTBR-202ENST00000440421 SCAF8Q9UPN6 1271 aaKnown RBP17.12■□□□□ 0.33
LTBR-202ENST00000440421 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
LTBR-202ENST00000440421 CIAO1O76071 339 aa17.11■□□□□ 0.33
LTBR-202ENST00000440421 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
LTBR-202ENST00000440421 RLBP1P12271 317 aa17.11■□□□□ 0.33
LTBR-202ENST00000440421 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
LTBR-202ENST00000440421 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
LTBR-202ENST00000440421 WNT10BO00744 389 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
LTBR-202ENST00000440421 SLC5A1P13866 664 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 FGFR2P21802 821 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 BCAMP50895 628 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 GRM1Q13255 1194 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 COPRSQ9NQ92 184 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 CEP126Q9P2H0 1117 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 FAM205AQ6ZU69 1335 aa17.1■□□□□ 0.33
LTBR-202ENST00000440421 IL15P40933 162 aaPredicted RBP17.09■□□□□ 0.33
LTBR-202ENST00000440421 FKBP1AP62942 108 aaKnown RBP17.09■□□□□ 0.33
LTBR-202ENST00000440421 CHAF1AQ13111 956 aaPredicted RBP17.09■□□□□ 0.33
LTBR-202ENST00000440421 MTX1Q13505 466 aa17.09■□□□□ 0.33
LTBR-202ENST00000440421 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
LTBR-202ENST00000440421 LPIN2Q92539 896 aa17.09■□□□□ 0.33
LTBR-202ENST00000440421 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 MMP14P50281 582 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 DLGAP5Q15398 846 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 CYP4F22Q6NT55 531 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 CDCA5Q96FF9 252 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 PCDHAC2Q9Y5I4 1007 aa17.08■□□□□ 0.32
LTBR-202ENST00000440421 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
LTBR-202ENST00000440421 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
LTBR-202ENST00000440421 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
LTBR-202ENST00000440421 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
LTBR-202ENST00000440421 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
LTBR-202ENST00000440421 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.323e-10■■■■■ 45.8
LTBR-202ENST00000440421 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
LTBR-202ENST00000440421 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
LTBR-202ENST00000440421 C2orf69Q8N8R5 385 aa17.06■□□□□ 0.32
LTBR-202ENST00000440421 ZBED3Q96IU2 234 aaPredicted RBP17.06■□□□□ 0.32
LTBR-202ENST00000440421 CAPNS2Q96L46 248 aa17.06■□□□□ 0.32
LTBR-202ENST00000440421 GBA2Q9HCG7 927 aaPredicted RBP17.06■□□□□ 0.32
LTBR-202ENST00000440421 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
LTBR-202ENST00000440421 TTF2Q9UNY4 1162 aaKnown RBP17.06■□□□□ 0.32
LTBR-202ENST00000440421 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
LTBR-202ENST00000440421 GRIK5Q16478 980 aa17.05■□□□□ 0.32
LTBR-202ENST00000440421 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
LTBR-202ENST00000440421 CLRN2A0PK11 232 aa17.04■□□□□ 0.32
LTBR-202ENST00000440421 ECE1P42892 770 aa17.04■□□□□ 0.32
LTBR-202ENST00000440421 HUNKP57058 714 aa17.04■□□□□ 0.32
LTBR-202ENST00000440421 TFCP2Q12800 502 aa17.04■□□□□ 0.32
LTBR-202ENST00000440421 MTMR14Q8NCE2 650 aa17.04■□□□□ 0.32
LTBR-202ENST00000440421 PRMT6Q96LA8 375 aaPredicted RBP17.04■□□□□ 0.32
LTBR-202ENST00000440421 AOX1Q06278 1338 aa17.03■□□□□ 0.32
LTBR-202ENST00000440421 SPDYE2BA6NHP3 402 aa17.03■□□□□ 0.32
LTBR-202ENST00000440421 SPDYE6P0CI01 402 aa17.03■□□□□ 0.32
LTBR-202ENST00000440421 ADORA1P30542 326 aa17.03■□□□□ 0.32
LTBR-202ENST00000440421 TIMM10P62072 90 aa17.03■□□□□ 0.32
LTBR-202ENST00000440421 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
LTBR-202ENST00000440421 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
LTBR-202ENST00000440421 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.32
LTBR-202ENST00000440421 MYO1BO43795 1136 aa17.02■□□□□ 0.32
LTBR-202ENST00000440421 AOC2O75106 756 aa17.02■□□□□ 0.32
LTBR-202ENST00000440421 PHKA1P46020 1223 aa17.02■□□□□ 0.32
LTBR-202ENST00000440421 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
LTBR-202ENST00000440421 HHIPL1Q96JK4 782 aa17.02■□□□□ 0.32
LTBR-202ENST00000440421 VEZTQ9HBM0 779 aa17.02■□□□□ 0.32
LTBR-202ENST00000440421 GNL3LQ9NVN8 582 aaKnown RBP17.02■□□□□ 0.32
LTBR-202ENST00000440421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
LTBR-202ENST00000440421 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
LTBR-202ENST00000440421 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 MS4A1P11836 297 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 CRKP46108 304 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 AKAP2Q9Y2D5 859 aa17.01■□□□□ 0.31
LTBR-202ENST00000440421 POLA2Q14181 598 aa17■□□□□ 0.31
LTBR-202ENST00000440421 MOB2Q70IA6 237 aa17■□□□□ 0.31
LTBR-202ENST00000440421 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
LTBR-202ENST00000440421 SSH3Q8TE77 659 aa17■□□□□ 0.31
LTBR-202ENST00000440421 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
LTBR-202ENST00000440421 NF2P35240 595 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
LTBR-202ENST00000440421 TTLL12Q14166 644 aaPredicted RBP16.99■□□□□ 0.31
LTBR-202ENST00000440421 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 RGMBQ6NW40 437 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
LTBR-202ENST00000440421 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 TDRD3Q9H7E2 651 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms