RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GYG1P46976 350 aa24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 LRRC24Q50LG9 513 aa24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 KLHDC4Q8TBB5 520 aa24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 SCAF8Q9UPN6 1271 aaKnown RBP24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 RIPOR2Q9Y4F9 1068 aa24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 PAPPA2Q9BXP8 1791 aa24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 MYH13Q9UKX3 1938 aa24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 NF2P35240 595 aa24.83■■□□□ 1.57
SHROOM1-204ENST00000440118 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.57
SHROOM1-204ENST00000440118 DLGAP5Q15398 846 aa24.83■■□□□ 1.57
SHROOM1-204ENST00000440118 FRAT2O75474 233 aaPredicted RBP24.82■■□□□ 1.56
SHROOM1-204ENST00000440118 NOGQ13253 232 aa24.82■■□□□ 1.56
SHROOM1-204ENST00000440118 TTLL12Q14166 644 aaPredicted RBP24.82■■□□□ 1.56
SHROOM1-204ENST00000440118 CAVIN4Q5BKX8 364 aa24.82■■□□□ 1.56
SHROOM1-204ENST00000440118 RGMBQ6NW40 437 aa24.82■■□□□ 1.56
SHROOM1-204ENST00000440118 APOBEC3FQ8IUX4 373 aaKnown RBP24.82■■□□□ 1.56
SHROOM1-204ENST00000440118 IPO8O15397 1037 aaKnown RBP24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 MYO1BO43795 1136 aa24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 ZNF157P51786 506 aaPredicted RBP24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 RBM5P52756 815 aaKnown RBP eCLIP24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 LBX1P52954 281 aa24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 CERS5Q8N5B7 392 aa24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 FRAT1Q92837 279 aaPredicted RBP24.81■■□□□ 1.56
SHROOM1-204ENST00000440118 FKBP1AP62942 108 aaKnown RBP24.8■■□□□ 1.56
SHROOM1-204ENST00000440118 MFSD14BQ5SR56 506 aa24.8■■□□□ 1.56
SHROOM1-204ENST00000440118 PRDM10Q9NQV6 1147 aa24.8■■□□□ 1.56
SHROOM1-204ENST00000440118 PDE8BO95263 885 aa24.79■■□□□ 1.56
SHROOM1-204ENST00000440118 PUM3Q15397 648 aaKnown RBP24.79■■□□□ 1.56
SHROOM1-204ENST00000440118 ARHGAP45Q92619 1136 aa24.79■■□□□ 1.56
SHROOM1-204ENST00000440118 CCDC102AQ96A19 550 aa24.79■■□□□ 1.56
SHROOM1-204ENST00000440118 LRRFIP2Q9Y608 721 aaKnown RBP24.79■■□□□ 1.56
SHROOM1-204ENST00000440118 EYA2O00167 538 aa24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 IFIT1P09914 478 aaKnown RBP24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 FKBP1BP68106 108 aa24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 CFAP100Q494V2 611 aa24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 PRAMEF18Q5VWM3 479 aa24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 TDRD7Q8NHU6 1098 aaKnown RBP24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 FAM84BQ96KN1 310 aaPredicted RBP24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 IQSEC3Q9UPP2 1182 aaPredicted RBP24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 FAM205AQ6ZU69 1335 aa24.78■■□□□ 1.56
SHROOM1-204ENST00000440118 HSPA8P11142 646 aaKnown RBP24.77■■□□□ 1.56
SHROOM1-204ENST00000440118 CHAF1AQ13111 956 aaPredicted RBP24.77■■□□□ 1.56
SHROOM1-204ENST00000440118 SIL1Q9H173 461 aa24.77■■□□□ 1.56
SHROOM1-204ENST00000440118 SLC5A1P13866 664 aa24.76■■□□□ 1.55
SHROOM1-204ENST00000440118 VGLL2Q8N8G2 317 aa24.76■■□□□ 1.55
SHROOM1-204ENST00000440118 MEIS3Q99687 375 aa24.76■■□□□ 1.55
SHROOM1-204ENST00000440118 TTF2Q9UNY4 1162 aaKnown RBP24.76■■□□□ 1.55
SHROOM1-204ENST00000440118 AKAP11Q9UKA4 1901 aa24.76■■□□□ 1.55
SHROOM1-204ENST00000440118 COL1A1P02452 1464 aaPredicted RBP24.76■■□□□ 1.55
SHROOM1-204ENST00000440118 CA12O43570 354 aa24.75■■□□□ 1.55
SHROOM1-204ENST00000440118 CAPN15O75808 1086 aa24.75■■□□□ 1.55
SHROOM1-204ENST00000440118 VEZTQ9HBM0 779 aa24.75■■□□□ 1.55
SHROOM1-204ENST00000440118 GNAI3P08754 354 aa24.74■■□□□ 1.55
SHROOM1-204ENST00000440118 RFX5P48382 616 aaPredicted RBP24.74■■□□□ 1.55
SHROOM1-204ENST00000440118 PTPN12Q05209 780 aaKnown RBP24.74■■□□□ 1.55
SHROOM1-204ENST00000440118 TSKSQ9UJT2 592 aa24.74■■□□□ 1.55
SHROOM1-204ENST00000440118 CLRN2A0PK11 232 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 SPDYE2BA6NHP3 402 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 BCAR3O75815 825 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 SPDYE6P0CI01 402 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 INTS3Q68E01 1043 aaKnown RBP24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 ATF7IPQ6VMQ6 1270 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 MTMR14Q8NCE2 650 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 TBC1D22AQ8WUA7 517 aa24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 ZBED3Q96IU2 234 aaPredicted RBP24.73■■□□□ 1.55
SHROOM1-204ENST00000440118 SLC10A3P09131 477 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 TRIM27P14373 513 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 MOB2Q70IA6 237 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 FBXO33Q7Z6M2 555 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 CLUAP1Q96AJ1 413 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 FBXO3Q9UK99 471 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 PCDHAC2Q9Y5I4 1007 aa24.72■■□□□ 1.55
SHROOM1-204ENST00000440118 FAM155AB1AL88 458 aaPredicted RBP24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 BCAMP50895 628 aa24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 PRKG1Q13976 671 aa24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 ARMC9Q7Z3E5 817 aa24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 LPIN2Q92539 896 aa24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 DEFB129Q9H1M3 183 aa24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 CEP126Q9P2H0 1117 aa24.71■■□□□ 1.55
SHROOM1-204ENST00000440118 UBE2Q2LH0YL09 131 aa24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 CIAO1O76071 339 aa24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 KIF23Q02241 960 aaPredicted RBP24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 ZKSCAN2Q63HK3 967 aa24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 RASAL3Q86YV0 1011 aa24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 PRMT6Q96LA8 375 aaPredicted RBP24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 ZIC5Q96T25 663 aa24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 SERPINA10Q9UK55 444 aa24.7■■□□□ 1.54
SHROOM1-204ENST00000440118 ATP2B3Q16720 1220 aa24.69■■□□□ 1.54
SHROOM1-204ENST00000440118 PPP2R3BQ9Y5P8 575 aa24.69■■□□□ 1.54
SHROOM1-204ENST00000440118 ZBED9Q6R2W3 1325 aa24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 SRGAP3O43295 1099 aa24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 FGFR2P21802 821 aa24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 IL15P40933 162 aaPredicted RBP24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 TNFAIP1Q13829 316 aa24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 ATG9AQ7Z3C6 839 aa24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 FTSJ3Q8IY81 847 aaKnown RBP24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 PA2G4Q9UQ80 394 aaKnown RBP24.68■■□□□ 1.54
SHROOM1-204ENST00000440118 CRKP46108 304 aa24.67■■□□□ 1.54
SHROOM1-204ENST00000440118 GNL3LQ9NVN8 582 aaKnown RBP24.67■■□□□ 1.54
SHROOM1-204ENST00000440118 ANGEL1Q9UNK9 670 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms