RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 CNNM1Q9NRU3 951 aa20.21■□□□□ 0.83
ITGB1-207ENST00000439974 SAGE1Q9NXZ1 904 aa20.21■□□□□ 0.83
ITGB1-207ENST00000439974 AKAP11Q9UKA4 1901 aa20.21■□□□□ 0.83
ITGB1-207ENST00000439974 IL1R1P14778 569 aa20.2■□□□□ 0.82
ITGB1-207ENST00000439974 NF2P35240 595 aa20.2■□□□□ 0.82
ITGB1-207ENST00000439974 PRAMEF18Q5VWM3 479 aa20.2■□□□□ 0.82
ITGB1-207ENST00000439974 APOBEC3FQ8IUX4 373 aaKnown RBP20.2■□□□□ 0.82
ITGB1-207ENST00000439974 FRAT1Q92837 279 aaPredicted RBP20.2■□□□□ 0.82
ITGB1-207ENST00000439974 MOB2Q70IA6 237 aa20.19■□□□□ 0.82
ITGB1-207ENST00000439974 REM2Q8IYK8 340 aaPredicted RBP20.19■□□□□ 0.82
ITGB1-207ENST00000439974 SUCLG2Q96I99 432 aa20.19■□□□□ 0.82
ITGB1-207ENST00000439974 ZBED3Q96IU2 234 aaPredicted RBP20.19■□□□□ 0.82
ITGB1-207ENST00000439974 PLIN1O60240 522 aa20.18■□□□□ 0.82
ITGB1-207ENST00000439974 TTLL12Q14166 644 aaPredicted RBP20.18■□□□□ 0.82
ITGB1-207ENST00000439974 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
ITGB1-207ENST00000439974 CSRNP1Q96S65 589 aa20.18■□□□□ 0.82
ITGB1-207ENST00000439974 RNF186Q9NXI6 227 aa20.18■□□□□ 0.82
ITGB1-207ENST00000439974 UTYO14607 1347 aa20.18■□□□□ 0.82
ITGB1-207ENST00000439974 UBE2Q2LH0YL09 131 aa20.17■□□□□ 0.82
ITGB1-207ENST00000439974 NBPF7P0C2Y1 421 aaPredicted RBP20.17■□□□□ 0.82
ITGB1-207ENST00000439974 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
ITGB1-207ENST00000439974 DLGAP5Q15398 846 aa20.17■□□□□ 0.82
ITGB1-207ENST00000439974 KAZALD1Q96I82 304 aa20.17■□□□□ 0.82
ITGB1-207ENST00000439974 TRPA1O75762 1119 aa20.16■□□□□ 0.82
ITGB1-207ENST00000439974 MTMR14Q8NCE2 650 aa20.16■□□□□ 0.82
ITGB1-207ENST00000439974 MCOLN1Q9GZU1 580 aa20.16■□□□□ 0.82
ITGB1-207ENST00000439974 COL1A1P02452 1464 aaPredicted RBP20.16■□□□□ 0.82
ITGB1-207ENST00000439974 UBE4AQ14139 1066 aa20.15■□□□□ 0.82
ITGB1-207ENST00000439974 CLUAP1Q96AJ1 413 aa20.15■□□□□ 0.82
ITGB1-207ENST00000439974 API5Q9BZZ5 524 aaKnown RBP20.15■□□□□ 0.82
ITGB1-207ENST00000439974 ECM29Q5VYK3 1845 aa20.14■□□□□ 0.81
ITGB1-207ENST00000439974 KIF16BQ96L93 1317 aa20.14■□□□□ 0.81
ITGB1-207ENST00000439974 CCDC85CA6NKD9 419 aa20.14■□□□□ 0.81
ITGB1-207ENST00000439974 F8W031 263 aaPredicted RBP20.14■□□□□ 0.81
ITGB1-207ENST00000439974 DGKZQ13574 1117 aa20.14■□□□□ 0.81
ITGB1-207ENST00000439974 RABL6Q3YEC7 729 aaPredicted RBP20.14■□□□□ 0.81
ITGB1-207ENST00000439974 ARMC9Q7Z3E5 817 aa20.14■□□□□ 0.81
ITGB1-207ENST00000439974 PUS3Q9BZE2 481 aaKnown RBP20.14■□□□□ 0.81
ITGB1-207ENST00000439974 BICC1Q9H694 974 aaKnown RBP20.14■□□□□ 0.81
ITGB1-207ENST00000439974 FAM205AQ6ZU69 1335 aa20.13■□□□□ 0.81
ITGB1-207ENST00000439974 TRIM27P14373 513 aa20.13■□□□□ 0.81
ITGB1-207ENST00000439974 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
ITGB1-207ENST00000439974 JAG2Q9Y219 1238 aa20.13■□□□□ 0.81
ITGB1-207ENST00000439974 MROH5Q6ZUA9 1318 aa20.12■□□□□ 0.81
ITGB1-207ENST00000439974 MYO1BO43795 1136 aa20.12■□□□□ 0.81
ITGB1-207ENST00000439974 HIBADHP31937 336 aaKnown RBP20.12■□□□□ 0.81
ITGB1-207ENST00000439974 TDRD7Q8NHU6 1098 aaKnown RBP20.12■□□□□ 0.81
ITGB1-207ENST00000439974 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
ITGB1-207ENST00000439974 DEFB129Q9H1M3 183 aa20.12■□□□□ 0.81
ITGB1-207ENST00000439974 RIPOR2Q9Y4F9 1068 aa20.12■□□□□ 0.81
ITGB1-207ENST00000439974 PPP2R3BQ9Y5P8 575 aa20.12■□□□□ 0.81
ITGB1-207ENST00000439974 SPDYE2BA6NHP3 402 aa20.11■□□□□ 0.81
ITGB1-207ENST00000439974 SPDYE6P0CI01 402 aa20.11■□□□□ 0.81
ITGB1-207ENST00000439974 GYG1P46976 350 aa20.11■□□□□ 0.81
ITGB1-207ENST00000439974 PRKG1Q13976 671 aa20.11■□□□□ 0.81
ITGB1-207ENST00000439974 ANKRD44Q8N8A2 993 aa20.11■□□□□ 0.81
ITGB1-207ENST00000439974 PCDHAC2Q9Y5I4 1007 aa20.11■□□□□ 0.81
ITGB1-207ENST00000439974 PTPN12Q05209 780 aaKnown RBP20.1■□□□□ 0.81
ITGB1-207ENST00000439974 ATF7IPQ6VMQ6 1270 aa20.1■□□□□ 0.81
ITGB1-207ENST00000439974 FAM84BQ96KN1 310 aaPredicted RBP20.1■□□□□ 0.81
ITGB1-207ENST00000439974 ANGEL1Q9UNK9 670 aaKnown RBP20.1■□□□□ 0.81
ITGB1-207ENST00000439974 CLRN2A0PK11 232 aa20.09■□□□□ 0.81
ITGB1-207ENST00000439974 IPO8O15397 1037 aaKnown RBP20.09■□□□□ 0.81
ITGB1-207ENST00000439974 MFSD14BQ5SR56 506 aa20.09■□□□□ 0.81
ITGB1-207ENST00000439974 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
ITGB1-207ENST00000439974 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
ITGB1-207ENST00000439974 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
ITGB1-207ENST00000439974 RBM5P52756 815 aaKnown RBP eCLIP20.08■□□□□ 0.81
ITGB1-207ENST00000439974 LRRC24Q50LG9 513 aa20.08■□□□□ 0.81
ITGB1-207ENST00000439974 METTL24Q5JXM2 366 aa20.08■□□□□ 0.81
ITGB1-207ENST00000439974 LDLRAD1Q5T700 205 aa20.08■□□□□ 0.81
ITGB1-207ENST00000439974 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.81
ITGB1-207ENST00000439974 VEZTQ9HBM0 779 aa20.08■□□□□ 0.81
ITGB1-207ENST00000439974 TM4SF4P48230 202 aa20.07■□□□□ 0.8
ITGB1-207ENST00000439974 SREBF2Q12772 1141 aa20.07■□□□□ 0.8
ITGB1-207ENST00000439974 MKRN3Q13064 507 aaKnown RBP20.07■□□□□ 0.8
ITGB1-207ENST00000439974 MAP3K11Q16584 847 aa20.07■□□□□ 0.8
ITGB1-207ENST00000439974 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
ITGB1-207ENST00000439974 MEIS3Q99687 375 aa20.07■□□□□ 0.8
ITGB1-207ENST00000439974 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
ITGB1-207ENST00000439974 SSC5DA1L4H1 1573 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 PPP1R12BO60237 982 aaPredicted RBP20.06■□□□□ 0.8
ITGB1-207ENST00000439974 PDE8BO95263 885 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 SUPT20HL1Q3ZLR7 823 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 FBXO33Q7Z6M2 555 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 SERPINA10Q9UK55 444 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 FZD1Q9UP38 647 aa20.06■□□□□ 0.8
ITGB1-207ENST00000439974 AOX1Q06278 1338 aa20.05■□□□□ 0.8
ITGB1-207ENST00000439974 RLBP1P12271 317 aa20.05■□□□□ 0.8
ITGB1-207ENST00000439974 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
ITGB1-207ENST00000439974 SPRYD7Q5W111 196 aa20.05■□□□□ 0.8
ITGB1-207ENST00000439974 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
ITGB1-207ENST00000439974 VGLL2Q8N8G2 317 aa20.05■□□□□ 0.8
ITGB1-207ENST00000439974 RCAN3Q9UKA8 241 aa20.05■□□□□ 0.8
ITGB1-207ENST00000439974 UBTFL1P0CB47 393 aaPredicted RBP20.04■□□□□ 0.8
ITGB1-207ENST00000439974 RGS19P49795 217 aa20.04■□□□□ 0.8
ITGB1-207ENST00000439974 TNFAIP1Q13829 316 aa20.04■□□□□ 0.8
ITGB1-207ENST00000439974 SPDYE2Q495Y8 402 aa20.04■□□□□ 0.8
ITGB1-207ENST00000439974 CTU1Q7Z7A3 348 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms