RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MROH5Q6ZUA9 1318 aa25.54■■□□□ 1.68
NCKIPSD-206ENST00000439518 CAPN15O75808 1086 aa25.53■■□□□ 1.68
NCKIPSD-206ENST00000439518 PRAMEF18Q5VWM3 479 aa25.53■■□□□ 1.68
NCKIPSD-206ENST00000439518 MTMR14Q8NCE2 650 aa25.53■■□□□ 1.68
NCKIPSD-206ENST00000439518 TDRD7Q8NHU6 1098 aaKnown RBP25.53■■□□□ 1.68
NCKIPSD-206ENST00000439518 FAM84BQ96KN1 310 aaPredicted RBP25.53■■□□□ 1.68
NCKIPSD-206ENST00000439518 FAM205AQ6ZU69 1335 aa25.53■■□□□ 1.68
NCKIPSD-206ENST00000439518 PAPPA2Q9BXP8 1791 aa25.52■■□□□ 1.68
NCKIPSD-206ENST00000439518 SLC10A3P09131 477 aa25.52■■□□□ 1.68
NCKIPSD-206ENST00000439518 LRRC24Q50LG9 513 aa25.52■■□□□ 1.68
NCKIPSD-206ENST00000439518 TSKSQ9UJT2 592 aa25.52■■□□□ 1.68
NCKIPSD-206ENST00000439518 HIBADHP31937 336 aaKnown RBP25.51■■□□□ 1.67
NCKIPSD-206ENST00000439518 GYG1P46976 350 aa25.51■■□□□ 1.67
NCKIPSD-206ENST00000439518 DLGAP5Q15398 846 aa25.51■■□□□ 1.67
NCKIPSD-206ENST00000439518 APOBEC3FQ8IUX4 373 aaKnown RBP25.51■■□□□ 1.67
NCKIPSD-206ENST00000439518 NOB1Q9ULX3 412 aaKnown RBP25.51■■□□□ 1.67
NCKIPSD-206ENST00000439518 KIF23Q02241 960 aaPredicted RBP25.5■■□□□ 1.67
NCKIPSD-206ENST00000439518 MOB2Q70IA6 237 aa25.5■■□□□ 1.67
NCKIPSD-206ENST00000439518 VGLL2Q8N8G2 317 aa25.5■■□□□ 1.67
NCKIPSD-206ENST00000439518 JAG2Q9Y219 1238 aa25.5■■□□□ 1.67
NCKIPSD-206ENST00000439518 KLHDC4Q8TBB5 520 aa25.49■■□□□ 1.67
NCKIPSD-206ENST00000439518 F8W031 263 aaPredicted RBP25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 PDE8BO95263 885 aa25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 RARSP54136 660 aaKnown RBP25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 METTL24Q5JXM2 366 aa25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 FBXO33Q7Z6M2 555 aa25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 RASAL3Q86YV0 1011 aa25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 PCDHAC2Q9Y5I4 1007 aa25.48■■□□□ 1.67
NCKIPSD-206ENST00000439518 UBE2Q2LH0YL09 131 aa25.47■■□□□ 1.67
NCKIPSD-206ENST00000439518 RFX5P48382 616 aaPredicted RBP25.47■■□□□ 1.67
NCKIPSD-206ENST00000439518 CFAP100Q494V2 611 aa25.47■■□□□ 1.67
NCKIPSD-206ENST00000439518 API5Q9BZZ5 524 aaKnown RBP25.47■■□□□ 1.67
NCKIPSD-206ENST00000439518 SPDYE2BA6NHP3 402 aa25.46■■□□□ 1.67
NCKIPSD-206ENST00000439518 SPDYE6P0CI01 402 aa25.46■■□□□ 1.67
NCKIPSD-206ENST00000439518 NF2P35240 595 aa25.46■■□□□ 1.67
NCKIPSD-206ENST00000439518 MFSD14BQ5SR56 506 aa25.45■■□□□ 1.66
NCKIPSD-206ENST00000439518 PRMT6Q96LA8 375 aaPredicted RBP25.45■■□□□ 1.66
NCKIPSD-206ENST00000439518 CSRNP1Q96S65 589 aa25.45■■□□□ 1.66
NCKIPSD-206ENST00000439518 DEFB129Q9H1M3 183 aa25.45■■□□□ 1.66
NCKIPSD-206ENST00000439518 UBTFL1P0CB47 393 aaPredicted RBP25.44■■□□□ 1.66
NCKIPSD-206ENST00000439518 PTPN12Q05209 780 aaKnown RBP25.44■■□□□ 1.66
NCKIPSD-206ENST00000439518 COL1A1P02452 1464 aaPredicted RBP25.44■■□□□ 1.66
NCKIPSD-206ENST00000439518 AOX1Q06278 1338 aa25.43■■□□□ 1.66
NCKIPSD-206ENST00000439518 FGFR2P21802 821 aa25.43■■□□□ 1.66
NCKIPSD-206ENST00000439518 SAGE1Q9NXZ1 904 aa25.43■■□□□ 1.66
NCKIPSD-206ENST00000439518 EYA2O00167 538 aa25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 MYO1BO43795 1136 aa25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 TTLL12Q14166 644 aaPredicted RBP25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 CAVIN4Q5BKX8 364 aa25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 VPS37DQ86XT2 251 aa25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 ARHGAP45Q92619 1136 aa25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 SERPINA10Q9UK55 444 aa25.42■■□□□ 1.66
NCKIPSD-206ENST00000439518 KIF16BQ96L93 1317 aa25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 CLRN2A0PK11 232 aa25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 PUM3Q15397 648 aaKnown RBP25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 REM2Q8IYK8 340 aaPredicted RBP25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 TTF2Q9UNY4 1162 aaKnown RBP25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 IQSEC3Q9UPP2 1182 aaPredicted RBP25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 PPP2R3BQ9Y5P8 575 aa25.41■■□□□ 1.66
NCKIPSD-206ENST00000439518 ECM29Q5VYK3 1845 aa25.4■■□□□ 1.66
NCKIPSD-206ENST00000439518 LDLRAD1Q5T700 205 aa25.4■■□□□ 1.66
NCKIPSD-206ENST00000439518 ATG9AQ7Z3C6 839 aa25.4■■□□□ 1.66
NCKIPSD-206ENST00000439518 ARMC9Q7Z3E5 817 aa25.4■■□□□ 1.66
NCKIPSD-206ENST00000439518 RNF186Q9NXI6 227 aa25.4■■□□□ 1.66
NCKIPSD-206ENST00000439518 CASP8AP2Q9UKL3 1982 aa25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 BCAMP50895 628 aa25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 RBM5P52756 815 aaKnown RBP eCLIP25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 GRIK5Q16478 980 aa25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 INTS3Q68E01 1043 aaKnown RBP25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 ABHD8Q96I13 439 aa25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 FBXO3Q9UK99 471 aa25.39■■□□□ 1.66
NCKIPSD-206ENST00000439518 TRPA1O75762 1119 aa25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 IFIT1P09914 478 aaKnown RBP25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 PRKG1Q13976 671 aa25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 MIER1Q8N108 512 aa25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 MEIS3Q99687 375 aa25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 HDAC5Q9UQL6 1122 aa25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 LRRFIP2Q9Y608 721 aaKnown RBP25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 SSC5DA1L4H1 1573 aa25.38■■□□□ 1.65
NCKIPSD-206ENST00000439518 ARAP2Q8WZ64 1704 aa25.37■■□□□ 1.65
NCKIPSD-206ENST00000439518 CHAF1AQ13111 956 aaPredicted RBP25.37■■□□□ 1.65
NCKIPSD-206ENST00000439518 TBC1D22AQ8WUA7 517 aa25.37■■□□□ 1.65
NCKIPSD-206ENST00000439518 VEZTQ9HBM0 779 aa25.37■■□□□ 1.65
NCKIPSD-206ENST00000439518 FRAT2O75474 233 aaPredicted RBP25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 CIAO1O76071 339 aa25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 MAP3K11Q16584 847 aa25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 SPDYE2Q495Y8 402 aa25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 DZIP1LQ8IYY4 767 aaKnown RBP25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 LPIN2Q92539 896 aa25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 ZNF70Q9UC06 446 aaPredicted RBP25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 ANGEL1Q9UNK9 670 aaKnown RBP25.36■■□□□ 1.65
NCKIPSD-206ENST00000439518 AKAP11Q9UKA4 1901 aa25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 CRKP46108 304 aa25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 HDLBPQ00341 1268 aaKnown RBP25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 RASA3Q14644 834 aa25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 SUPT20HL1Q3ZLR7 823 aa25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 TDRD3Q9H7E2 651 aaKnown RBP25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 FZD1Q9UP38 647 aa25.35■■□□□ 1.65
NCKIPSD-206ENST00000439518 SLC5A1P13866 664 aa25.34■■□□□ 1.65
NCKIPSD-206ENST00000439518 NBPF12Q5TAG4 269 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms