RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
TNFRSF1A-203ENST00000437813 PCDHAC2Q9Y5I4 1007 aa18.25■□□□□ 0.51
TNFRSF1A-203ENST00000437813 COL1A1P02452 1464 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-203ENST00000437813 AOX1Q06278 1338 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 UBE2Q2LH0YL09 131 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 SSH1Q8WYL5 1049 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 MCOLN1Q9GZU1 580 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 CHMP3Q9Y3E7 222 aa18.24■□□□□ 0.51
TNFRSF1A-203ENST00000437813 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 E9PSI1 815 aa18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 UBE4AQ14139 1066 aa18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 TDRD7Q8NHU6 1098 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 HDAC9Q9UKV0 1011 aa18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 PTPRCP08575 1304 aa18.23■□□□□ 0.51
TNFRSF1A-203ENST00000437813 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-203ENST00000437813 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
TNFRSF1A-203ENST00000437813 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-203ENST00000437813 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
TNFRSF1A-203ENST00000437813 BICC1Q9H694 974 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-203ENST00000437813 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
TNFRSF1A-203ENST00000437813 TRPA1O75762 1119 aa18.21■□□□□ 0.51
TNFRSF1A-203ENST00000437813 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
TNFRSF1A-203ENST00000437813 RGS19P49795 217 aa18.21■□□□□ 0.51
TNFRSF1A-203ENST00000437813 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
TNFRSF1A-203ENST00000437813 PTPN12Q05209 780 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-203ENST00000437813 DLGAP5Q15398 846 aa18.2■□□□□ 0.5
TNFRSF1A-203ENST00000437813 MAP3K11Q16584 847 aa18.2■□□□□ 0.5
TNFRSF1A-203ENST00000437813 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
TNFRSF1A-203ENST00000437813 PRMT6Q96LA8 375 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-203ENST00000437813 PLIN1O60240 522 aa18.19■□□□□ 0.5
TNFRSF1A-203ENST00000437813 GYG1P46976 350 aa18.19■□□□□ 0.5
TNFRSF1A-203ENST00000437813 TM4SF4P48230 202 aa18.19■□□□□ 0.5
TNFRSF1A-203ENST00000437813 DEFB129Q9H1M3 183 aa18.19■□□□□ 0.5
TNFRSF1A-203ENST00000437813 DGKZQ13574 1117 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 CFAP100Q494V2 611 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 FBXO33Q7Z6M2 555 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 JAG2Q9Y219 1238 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 MROH5Q6ZUA9 1318 aa18.18■□□□□ 0.5
TNFRSF1A-203ENST00000437813 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-203ENST00000437813 NF2P35240 595 aa18.17■□□□□ 0.5
TNFRSF1A-203ENST00000437813 RFX5P48382 616 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-203ENST00000437813 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
TNFRSF1A-203ENST00000437813 FZD1Q9UP38 647 aa18.17■□□□□ 0.5
TNFRSF1A-203ENST00000437813 PPP2R3BQ9Y5P8 575 aa18.17■□□□□ 0.5
TNFRSF1A-203ENST00000437813 TNRC18O15417 2968 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-203ENST00000437813 F8W031 263 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-203ENST00000437813 GRIK5Q16478 980 aa18.16■□□□□ 0.5
TNFRSF1A-203ENST00000437813 CFHR5Q9BXR6 569 aa18.16■□□□□ 0.5
TNFRSF1A-203ENST00000437813 OTOFQ9HC10 1997 aa18.16■□□□□ 0.5
TNFRSF1A-203ENST00000437813 FGFR2P21802 821 aa18.15■□□□□ 0.5
TNFRSF1A-203ENST00000437813 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-203ENST00000437813 MFSD14BQ5SR56 506 aa18.15■□□□□ 0.5
TNFRSF1A-203ENST00000437813 SPRYD7Q5W111 196 aa18.15■□□□□ 0.5
TNFRSF1A-203ENST00000437813 KLHDC4Q8TBB5 520 aa18.15■□□□□ 0.5
TNFRSF1A-203ENST00000437813 SERPINA10Q9UK55 444 aa18.15■□□□□ 0.5
TNFRSF1A-203ENST00000437813 CLRN2A0PK11 232 aa18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CCDC85CA6NKD9 419 aa18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 PDE8BO95263 885 aa18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 TTLL12Q14166 644 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 ARMC9Q7Z3E5 817 aa18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 ANGEL1Q9UNK9 670 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
TNFRSF1A-203ENST00000437813 PRKG1Q13976 671 aa18.13■□□□□ 0.49
TNFRSF1A-203ENST00000437813 NBPF12Q5TAG4 269 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CLMNQ96JQ2 1002 aa18.13■□□□□ 0.49
TNFRSF1A-203ENST00000437813 TEPSINQ96N21 525 aa18.13■□□□□ 0.49
TNFRSF1A-203ENST00000437813 UNCXA6NJT0 531 aa18.12■□□□□ 0.49
TNFRSF1A-203ENST00000437813 ATG9AQ7Z3C6 839 aa18.12■□□□□ 0.49
TNFRSF1A-203ENST00000437813 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
TNFRSF1A-203ENST00000437813 ZNF70Q9UC06 446 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-203ENST00000437813 TTF2Q9UNY4 1162 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-203ENST00000437813 HTTP42858 3142 aa18.12■□□□□ 0.49
TNFRSF1A-203ENST00000437813 MYO1BO43795 1136 aa18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 USP2O75604 605 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 TBC1D8O95759 1140 aa18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 RASA3Q14644 834 aa18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 METTL24Q5JXM2 366 aa18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CTU1Q7Z7A3 348 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CDAN1Q8IWY9 1227 aa18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-203ENST00000437813 GJA5P36382 358 aa18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 HDLBPQ00341 1268 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 MKRN3Q13064 507 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 ZNF296Q8WUU4 475 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 TDRD3Q9H7E2 651 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 SMC4Q9NTJ3 1288 aa18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 IQSEC3Q9UPP2 1182 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
TNFRSF1A-203ENST00000437813 EYA2O00167 538 aa18.09■□□□□ 0.49
TNFRSF1A-203ENST00000437813 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-203ENST00000437813 CRKP46108 304 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms