RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 VEZTQ9HBM0 779 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
LINC01088-201ENST00000437737 MKI67P46013 3256 aaKnown RBP18.05■□□□□ 0.48
LINC01088-201ENST00000437737 OTOFQ9HC10 1997 aa18.04■□□□□ 0.48
LINC01088-201ENST00000437737 PI4KAP2A4QPH2 592 aa18.04■□□□□ 0.48
LINC01088-201ENST00000437737 F8W031 263 aaPredicted RBP18.04■□□□□ 0.48
LINC01088-201ENST00000437737 CWF19L2Q2TBE0 894 aaKnown RBP18.04■□□□□ 0.48
LINC01088-201ENST00000437737 UBE3BQ7Z3V4 1068 aa18.04■□□□□ 0.48
LINC01088-201ENST00000437737 PI4KAP1Q8N8J0 262 aa18.04■□□□□ 0.48
LINC01088-201ENST00000437737 CHMP4AQ9BY43 222 aa18.04■□□□□ 0.48
LINC01088-201ENST00000437737 CD209Q9NNX6 404 aa18.04■□□□□ 0.48
LINC01088-201ENST00000437737 ITGA6P23229 1130 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 GJA5P36382 358 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
LINC01088-201ENST00000437737 CFAP100Q494V2 611 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
LINC01088-201ENST00000437737 ANKRD13AQ8IZ07 590 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 MTMR14Q8NCE2 650 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 COLQQ9Y215 455 aaPredicted RBP18.03■□□□□ 0.48
LINC01088-201ENST00000437737 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
LINC01088-201ENST00000437737 CERS5Q8N5B7 392 aa18.02■□□□□ 0.48
LINC01088-201ENST00000437737 ZNF333Q96JL9 665 aa18.02■□□□□ 0.48
LINC01088-201ENST00000437737 CENPFP49454 3210 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 USP2O75604 605 aaPredicted RBP18.01■□□□□ 0.47
LINC01088-201ENST00000437737 RBM5P52756 815 aaKnown RBP eCLIP18.01■□□□□ 0.47
LINC01088-201ENST00000437737 CHRNDQ07001 517 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 ARHGEF6Q15052 776 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 SLC4A8Q2Y0W8 1093 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 NBPF11Q86T75 865 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 PTPN18Q99952 460 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 ELP3Q9H9T3 547 aa18.01■□□□□ 0.47
LINC01088-201ENST00000437737 A0A1B0GUL6 1792 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 TESPA1A2RU30 521 aaPredicted RBP18■□□□□ 0.47
LINC01088-201ENST00000437737 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 H7C1W4 665 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 SPDYE6P0CI01 402 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 CAP1Q01518 475 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 OPTNQ96CV9 577 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 PRMT6Q96LA8 375 aaPredicted RBP18■□□□□ 0.47
LINC01088-201ENST00000437737 PTCH2Q9Y6C5 1203 aa18■□□□□ 0.47
LINC01088-201ENST00000437737 MYCP01106 439 aaPredicted RBP17.99■□□□□ 0.47
LINC01088-201ENST00000437737 RASA3Q14644 834 aa17.99■□□□□ 0.47
LINC01088-201ENST00000437737 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
LINC01088-201ENST00000437737 TAF5LO75529 589 aa17.98■□□□□ 0.47
LINC01088-201ENST00000437737 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
LINC01088-201ENST00000437737 ZNF804AQ7Z570 1209 aa17.98■□□□□ 0.47
LINC01088-201ENST00000437737 PLA2G12BQ9BX93 195 aa17.98■□□□□ 0.47
LINC01088-201ENST00000437737 ZFYVE28Q9HCC9 887 aa17.98■□□□□ 0.47
LINC01088-201ENST00000437737 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
LINC01088-201ENST00000437737 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
LINC01088-201ENST00000437737 SNAP23O00161 211 aa17.97■□□□□ 0.47
LINC01088-201ENST00000437737 APAF1O14727 1248 aa17.97■□□□□ 0.47
LINC01088-201ENST00000437737 TNFAIP1Q13829 316 aa17.97■□□□□ 0.47
LINC01088-201ENST00000437737 TSPYL6Q8N831 410 aa17.97■□□□□ 0.47
LINC01088-201ENST00000437737 AOX1Q06278 1338 aa17.97■□□□□ 0.47
LINC01088-201ENST00000437737 BRCA2P51587 3418 aa17.96■□□□□ 0.47
LINC01088-201ENST00000437737 CCL15-CCL14A0A0B4J2E2 113 aa17.96■□□□□ 0.47
LINC01088-201ENST00000437737 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
LINC01088-201ENST00000437737 CCL15Q16663 113 aa17.96■□□□□ 0.47
LINC01088-201ENST00000437737 HELBQ8NG08 1087 aaPredicted RBP17.96■□□□□ 0.47
LINC01088-201ENST00000437737 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.46
LINC01088-201ENST00000437737 H0YGN5 161 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 CSF1RP07333 972 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 IL1R1P14778 569 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 GCKRQ14397 625 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 C15orf52Q6ZUT6 534 aaKnown RBP17.95■□□□□ 0.46
LINC01088-201ENST00000437737 BRI3BPQ8WY22 251 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 MS4A4AQ96JQ5 239 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 ZSWIM8A7E2V4 1837 aa17.95■□□□□ 0.46
LINC01088-201ENST00000437737 WDHD1O75717 1129 aaPredicted RBP17.94■□□□□ 0.46
LINC01088-201ENST00000437737 GTF2A2P52657 109 aa17.94■□□□□ 0.46
LINC01088-201ENST00000437737 G2E3Q7L622 706 aa17.94■□□□□ 0.46
LINC01088-201ENST00000437737 MIER1Q8N108 512 aa17.94■□□□□ 0.46
LINC01088-201ENST00000437737 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
LINC01088-201ENST00000437737 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
LINC01088-201ENST00000437737 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
LINC01088-201ENST00000437737 ARAP2Q8WZ64 1704 aa17.93■□□□□ 0.46
LINC01088-201ENST00000437737 TRIOBPQ9H2D6 2365 aa17.93■□□□□ 0.46
LINC01088-201ENST00000437737 KIF22Q14807 665 aa17.93■□□□□ 0.46
LINC01088-201ENST00000437737 SH3TC2Q8TF17 1288 aa17.93■□□□□ 0.46
LINC01088-201ENST00000437737 OTUD5Q96G74 571 aa17.93■□□□□ 0.46
LINC01088-201ENST00000437737 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
LINC01088-201ENST00000437737 ZNF70Q9UC06 446 aaPredicted RBP17.93■□□□□ 0.46
LINC01088-201ENST00000437737 CSADQ9Y600 493 aa17.93■□□□□ 0.46
LINC01088-201ENST00000437737 CEP290O15078 2479 aa17.92■□□□□ 0.46
LINC01088-201ENST00000437737 CASP7P55210 303 aa17.92■□□□□ 0.46
LINC01088-201ENST00000437737 IFIT5Q13325 482 aaKnown RBP17.92■□□□□ 0.46
LINC01088-201ENST00000437737 VGLL4Q14135 290 aa17.92■□□□□ 0.46
LINC01088-201ENST00000437737 SPDYE2Q495Y8 402 aa17.92■□□□□ 0.46
LINC01088-201ENST00000437737 CHRDL2Q6WN34 429 aa17.92■□□□□ 0.46
LINC01088-201ENST00000437737 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.92■□□□□ 0.46
LINC01088-201ENST00000437737 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
LINC01088-201ENST00000437737 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
LINC01088-201ENST00000437737 TDRD3Q9H7E2 651 aaKnown RBP17.92■□□□□ 0.46
LINC01088-201ENST00000437737 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
LINC01088-201ENST00000437737 TNNI2P48788 182 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms