RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 PHKA1P46020 1223 aa22.3■■□□□ 1.16
IRF1-203ENST00000437654 WDR66Q8TBY9 1149 aa22.3■■□□□ 1.16
IRF1-203ENST00000437654 DBNDD2Q9BQY9 259 aa22.3■■□□□ 1.16
IRF1-203ENST00000437654 CCDC8Q9H0W5 538 aaPredicted RBP22.3■■□□□ 1.16
IRF1-203ENST00000437654 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
IRF1-203ENST00000437654 SUGT1Q9Y2Z0 365 aa22.3■■□□□ 1.16
IRF1-203ENST00000437654 IGSF3O75054 1194 aa22.29■■□□□ 1.16
IRF1-203ENST00000437654 ANKRD45Q5TZF3 282 aa22.29■■□□□ 1.16
IRF1-203ENST00000437654 VEGFAP15692 232 aaPredicted RBP22.28■■□□□ 1.16
IRF1-203ENST00000437654 TTC39AQ5SRH9 613 aa22.28■■□□□ 1.16
IRF1-203ENST00000437654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.28■■□□□ 1.16
IRF1-203ENST00000437654 GMLQ99445 158 aa22.28■■□□□ 1.16
IRF1-203ENST00000437654 ARAP2Q8WZ64 1704 aa22.28■■□□□ 1.16
IRF1-203ENST00000437654 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
IRF1-203ENST00000437654 ZGPATQ8N5A5 531 aaKnown RBP22.27■■□□□ 1.16
IRF1-203ENST00000437654 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
IRF1-203ENST00000437654 GPRC5DQ9NZD1 345 aa22.27■■□□□ 1.16
IRF1-203ENST00000437654 SALL1Q9NSC2 1324 aa22.27■■□□□ 1.16
IRF1-203ENST00000437654 GMPSP49915 693 aaPredicted RBP22.26■■□□□ 1.15
IRF1-203ENST00000437654 FBXW7Q969H0 707 aa22.26■■□□□ 1.15
IRF1-203ENST00000437654 HACL1Q9UJ83 578 aa22.26■■□□□ 1.15
IRF1-203ENST00000437654 H7C1D1 291 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 SMARCA5O60264 1052 aaPredicted RBP22.25■■□□□ 1.15
IRF1-203ENST00000437654 SCNN1DP51172 638 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 NUCB1Q02818 461 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 RASGRF1Q13972 1273 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 MFSD14BQ5SR56 506 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 OGFOD1Q8N543 542 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 SPATA5Q8NB90 893 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
IRF1-203ENST00000437654 TLR7Q9NYK1 1049 aaKnown RBP22.25■■□□□ 1.15
IRF1-203ENST00000437654 CNOT7Q9UIV1 285 aaKnown RBP22.25■■□□□ 1.15
IRF1-203ENST00000437654 IQSEC3Q9UPP2 1182 aaPredicted RBP22.25■■□□□ 1.15
IRF1-203ENST00000437654 WDR90Q96KV7 1748 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 USP17L8P0C7I0 530 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 ZNF784Q8NCA9 323 aaPredicted RBP22.24■■□□□ 1.15
IRF1-203ENST00000437654 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 RRAGCQ9HB90 399 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 HDAC9Q9UKV0 1011 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 ZBTB12Q9Y330 459 aaPredicted RBP22.24■■□□□ 1.15
IRF1-203ENST00000437654 PSME4Q14997 1843 aa22.24■■□□□ 1.15
IRF1-203ENST00000437654 SCN9AQ15858 1988 aa22.23■■□□□ 1.15
IRF1-203ENST00000437654 POTECB2RU33 542 aa22.23■■□□□ 1.15
IRF1-203ENST00000437654 ATP5JP18859 108 aa22.23■■□□□ 1.15
IRF1-203ENST00000437654 CHAF1AQ13111 956 aaPredicted RBP22.23■■□□□ 1.15
IRF1-203ENST00000437654 SPTY2D1Q68D10 685 aaPredicted RBP22.23■■□□□ 1.15
IRF1-203ENST00000437654 PNMA8AQ86V59 439 aaPredicted RBP22.23■■□□□ 1.15
IRF1-203ENST00000437654 CHD1LQ86WJ1 897 aa22.23■■□□□ 1.15
IRF1-203ENST00000437654 MCAMP43121 646 aa22.22■■□□□ 1.15
IRF1-203ENST00000437654 ZNF280AP59817 542 aaPredicted RBP22.22■■□□□ 1.15
IRF1-203ENST00000437654 CERS5Q8N5B7 392 aa22.22■■□□□ 1.15
IRF1-203ENST00000437654 ADARB2Q9NS39 739 aaKnown RBP22.22■■□□□ 1.15
IRF1-203ENST00000437654 ECHDC1Q9NTX5 307 aa22.22■■□□□ 1.15
IRF1-203ENST00000437654 TTC41PQ6P2S7 1318 aa22.22■■□□□ 1.15
IRF1-203ENST00000437654 HDLBPQ00341 1268 aaKnown RBP22.21■■□□□ 1.15
IRF1-203ENST00000437654 USP50Q70EL3 339 aaPredicted RBP22.21■■□□□ 1.15
IRF1-203ENST00000437654 CENPQQ7L2Z9 268 aaPredicted RBP22.21■■□□□ 1.15
IRF1-203ENST00000437654 MICALL2Q8IY33 904 aa22.21■■□□□ 1.15
IRF1-203ENST00000437654 MAST3O60307 1309 aa22.21■■□□□ 1.15
IRF1-203ENST00000437654 SCN4AP35499 1836 aa22.2■■□□□ 1.14
IRF1-203ENST00000437654 EPHX2P34913 555 aa22.2■■□□□ 1.14
IRF1-203ENST00000437654 EPS15P42566 896 aa22.2■■□□□ 1.14
IRF1-203ENST00000437654 TMED8Q6PL24 325 aaPredicted RBP22.2■■□□□ 1.14
IRF1-203ENST00000437654 ZNF526Q8TF50 670 aaPredicted RBP22.2■■□□□ 1.14
IRF1-203ENST00000437654 CCDC136Q96JN2 1154 aa22.2■■□□□ 1.14
IRF1-203ENST00000437654 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
IRF1-203ENST00000437654 PPP4R2Q9NY27 417 aa22.2■■□□□ 1.14
IRF1-203ENST00000437654 ERC2O15083 957 aa22.19■■□□□ 1.14
IRF1-203ENST00000437654 TTF1Q15361 905 aaPredicted RBP22.19■■□□□ 1.14
IRF1-203ENST00000437654 B4GALNT3Q6L9W6 998 aa22.19■■□□□ 1.14
IRF1-203ENST00000437654 KIAA0825Q8IV33 1275 aa22.19■■□□□ 1.14
IRF1-203ENST00000437654 MXD3Q9BW11 206 aa22.19■■□□□ 1.14
IRF1-203ENST00000437654 NMRK2Q9NPI5 230 aa22.19■■□□□ 1.14
IRF1-203ENST00000437654 STAP2Q9UGK3 403 aa22.19■■□□□ 1.14
IRF1-203ENST00000437654 LDHBP07195 334 aaKnown RBP22.18■■□□□ 1.14
IRF1-203ENST00000437654 SCARF1Q14162 830 aa22.18■■□□□ 1.14
IRF1-203ENST00000437654 C16orf71Q8IYS4 520 aaPredicted RBP22.18■■□□□ 1.14
IRF1-203ENST00000437654 MTMR14Q8NCE2 650 aa22.18■■□□□ 1.14
IRF1-203ENST00000437654 SERPINA10Q9UK55 444 aa22.18■■□□□ 1.14
IRF1-203ENST00000437654 JAG2Q9Y219 1238 aa22.18■■□□□ 1.14
IRF1-203ENST00000437654 MX1P20591 662 aa22.17■■□□□ 1.14
IRF1-203ENST00000437654 ERICH6Q7L0X2 663 aa22.17■■□□□ 1.14
IRF1-203ENST00000437654 SLF2Q8IX21 1173 aa22.17■■□□□ 1.14
IRF1-203ENST00000437654 ZC3H15Q8WU90 426 aaKnown RBP22.17■■□□□ 1.14
IRF1-203ENST00000437654 HAUS7Q99871 368 aa22.17■■□□□ 1.14
IRF1-203ENST00000437654 LNPKQ9C0E8 428 aa22.17■■□□□ 1.14
IRF1-203ENST00000437654 BCL11AQ9H165 835 aa22.17■■□□□ 1.14
IRF1-203ENST00000437654 TTF2Q9UNY4 1162 aaKnown RBP22.17■■□□□ 1.14
IRF1-203ENST00000437654 COL1A1P02452 1464 aaPredicted RBP22.16■■□□□ 1.14
IRF1-203ENST00000437654 SALL3Q9BXA9 1300 aa22.16■■□□□ 1.14
IRF1-203ENST00000437654 GLRX3O76003 335 aaKnown RBP22.16■■□□□ 1.14
IRF1-203ENST00000437654 ZAP70P43403 619 aa22.16■■□□□ 1.14
IRF1-203ENST00000437654 HHIPL2Q6UWX4 724 aa22.16■■□□□ 1.14
IRF1-203ENST00000437654 MYOZ2Q9NPC6 264 aa22.16■■□□□ 1.14
IRF1-203ENST00000437654 ABCF2Q9UG63 623 aa22.16■■□□□ 1.14
IRF1-203ENST00000437654 KIF3CO14782 793 aa22.15■■□□□ 1.14
IRF1-203ENST00000437654 CYP2E1P05181 493 aaPredicted RBP22.15■■□□□ 1.14
IRF1-203ENST00000437654 OSBPL3Q9H4L5 887 aa22.15■■□□□ 1.14
IRF1-203ENST00000437654 ZNF646O15015 1829 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms