RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 APOBRQ0VD83 1088 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ARMCX5Q6P1M9 558 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 SYT10Q6XYQ8 523 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ILDR1Q86SU0 546 aaPredicted RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 AGXT2Q9BYV1 514 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 XPO4Q9C0E2 1151 aaKnown RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 PCDHA7Q9UN72 937 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 NRDCO43847 1150 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
TOP3B-206ENST00000436282 ADALQ6DHV7 355 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 FBXW7Q969H0 707 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 NPHP1O15259 732 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 SMC2O95347 1197 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 ST7Q9NRC1 585 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 KIAA1468Q9P260 1216 aa17.35■□□□□ 0.37
TOP3B-206ENST00000436282 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 ZRSR1Q15695 479 aaKnown RBP17.34■□□□□ 0.37
TOP3B-206ENST00000436282 RTEL1Q9NZ71 1219 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 IFNKQ9P0W0 207 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.371e-8■■□□□ 11.9
TOP3B-206ENST00000436282 SH3TC1Q8TE82 1336 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 EXOSC10Q01780 885 aaKnown RBP17.34■□□□□ 0.37
TOP3B-206ENST00000436282 DPCR1Q3MIW9 517 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 HAUS7Q99871 368 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 NOL10Q9BSC4 688 aaKnown RBP17.34■□□□□ 0.37
TOP3B-206ENST00000436282 CLCN6P51797 869 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
TOP3B-206ENST00000436282 TIGD1Q96MW7 591 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 FHOD1Q9Y613 1164 aa17.34■□□□□ 0.37
TOP3B-206ENST00000436282 TPM4P67936 248 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
TOP3B-206ENST00000436282 CHMP4CQ96CF2 233 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 CALCOCO1Q9P1Z2 691 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 A0A1B0GVL5 298 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 NDUFA8P51970 172 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 GUCY1B3Q02153 619 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 LRRN4CLQ8ND94 238 aa17.33■□□□□ 0.36
TOP3B-206ENST00000436282 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
TOP3B-206ENST00000436282 DCCP43146 1447 aa17.32■□□□□ 0.36
TOP3B-206ENST00000436282 LMTK3Q96Q04 1460 aa17.32■□□□□ 0.36
TOP3B-206ENST00000436282 RABL6Q3YEC7 729 aaPredicted RBP17.32■□□□□ 0.36
TOP3B-206ENST00000436282 NCOA5Q9HCD5 579 aaKnown RBP17.32■□□□□ 0.36
TOP3B-206ENST00000436282 CCP110O43303 1012 aa17.32■□□□□ 0.36
TOP3B-206ENST00000436282 ZNF274Q96GC6 653 aaPredicted RBP17.32■□□□□ 0.36
TOP3B-206ENST00000436282 TMEM51Q9NW97 253 aa17.32■□□□□ 0.36
TOP3B-206ENST00000436282 COL18A1P39060 1754 aa17.32■□□□□ 0.36
TOP3B-206ENST00000436282 ERICH4A6NGS2 130 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 ARHGAP29Q52LW3 1261 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 KBTBD3Q8NAB2 608 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 DSCC1Q9BVC3 393 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 NEDD4P46934 1319 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 PHLPP2Q6ZVD8 1323 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 PNMA6AP0CW24 399 aaPredicted RBP17.31■□□□□ 0.36
TOP3B-206ENST00000436282 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
TOP3B-206ENST00000436282 LINC00301Q8NCQ3 95 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 WDR17Q8IZU2 1322 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
TOP3B-206ENST00000436282 CYP2C19P33261 490 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 NLRP12P59046 1061 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 KCNG4Q8TDN1 519 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 CPDO75976 1380 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 CASP7P55210 303 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 STK38Q15208 465 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 SF3A1Q15459 793 aaKnown RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 ARGLU1Q9NWB6 273 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 EVA1CP58658 441 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 TIMM10P62072 90 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 NCAPHQ15003 741 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 HOMER1Q86YM7 354 aa17.3■□□□□ 0.36
TOP3B-206ENST00000436282 BBXQ8WY36 941 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 NAP1L2Q9ULW6 460 aaPredicted RBP17.3■□□□□ 0.36
TOP3B-206ENST00000436282 E7EWF7 191 aa17.29■□□□□ 0.36
TOP3B-206ENST00000436282 YEATS4O95619 227 aa17.29■□□□□ 0.36
TOP3B-206ENST00000436282 SLC3A2P08195 630 aaKnown RBP17.29■□□□□ 0.36
TOP3B-206ENST00000436282 ZRANB2O95218 330 aaKnown RBP eCLIP17.29■□□□□ 0.36
TOP3B-206ENST00000436282 FDPSP14324 419 aaKnown RBP17.29■□□□□ 0.36
TOP3B-206ENST00000436282 PLA2G4AP47712 749 aa17.29■□□□□ 0.36
TOP3B-206ENST00000436282 FOXO4P98177 505 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms