RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 EPB42P16452 691 aa10.44□□□□□ -0.74
PTPRK-212ENST00000434424 COL9A3Q14050 684 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-212ENST00000434424 CKAP2LQ8IYA6 745 aa10.44□□□□□ -0.74
PTPRK-212ENST00000434424 RASGRP4Q8TDF6 673 aa10.44□□□□□ -0.74
PTPRK-212ENST00000434424 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
PTPRK-212ENST00000434424 SPATA31C1P0DKV0 1188 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 GSTT1P30711 240 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 BMS1Q14692 1282 aaKnown RBP10.43□□□□□ -0.74
PTPRK-212ENST00000434424 NFE2L2Q16236 605 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 PMEPA1Q969W9 287 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 SPON2Q9BUD6 331 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 KRTAP4-8Q9BYQ9 185 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 SEMA6BQ9H3T3 888 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 KBTBD4Q9NVX7 518 aa10.43□□□□□ -0.74
PTPRK-212ENST00000434424 TTF2Q9UNY4 1162 aaKnown RBP10.43□□□□□ -0.74
PTPRK-212ENST00000434424 SBNO2Q9Y2G9 1366 aa10.42□□□□□ -0.74
PTPRK-212ENST00000434424 SSBP05455 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTPRK-212ENST00000434424 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
PTPRK-212ENST00000434424 EGFLAMQ63HQ2 1017 aa10.42□□□□□ -0.74
PTPRK-212ENST00000434424 ZNF746Q6NUN9 644 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-212ENST00000434424 SEC16BQ96JE7 1060 aa10.42□□□□□ -0.74
PTPRK-212ENST00000434424 SLC30A3Q99726 388 aa10.42□□□□□ -0.74
PTPRK-212ENST00000434424 RSRP1Q9BUV0 290 aa10.42□□□□□ -0.74
PTPRK-212ENST00000434424 CHRDQ9H2X0 955 aa10.42□□□□□ -0.74
PTPRK-212ENST00000434424 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTPRK-212ENST00000434424 EREGO14944 169 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 SIN3BO75182 1162 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 PWP1Q13610 501 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 GRM2Q14416 872 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 RELL1Q8IUW5 271 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 KIAA0825Q8IV33 1275 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 MRFAP1L1Q96HT8 127 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 ABI2Q9NYB9 513 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-212ENST00000434424 STARD13Q9Y3M8 1113 aa10.41□□□□□ -0.74
PTPRK-212ENST00000434424 ADARB2-AS1A8MUL3 147 aa10.4□□□□□ -0.74
PTPRK-212ENST00000434424 XYLBO75191 536 aa10.4□□□□□ -0.74
PTPRK-212ENST00000434424 GATA4P43694 442 aa10.4□□□□□ -0.74
PTPRK-212ENST00000434424 NBPF6Q5VWK0 638 aa10.4□□□□□ -0.74
PTPRK-212ENST00000434424 NBPF4Q96M43 638 aa10.4□□□□□ -0.74
PTPRK-212ENST00000434424 CNTN3Q9P232 1028 aa10.4□□□□□ -0.74
PTPRK-212ENST00000434424 TRAK1Q9UPV9 953 aa10.39□□□□□ -0.75
PTPRK-212ENST00000434424 ATAD2BQ9ULI0 1458 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 ALAS2P22557 587 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 CES1P23141 567 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 TTC39BQ5VTQ0 682 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-212ENST00000434424 KIAA0319Q5VV43 1072 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 C8orf86Q6ZUL3 223 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 NLGN1Q8N2Q7 840 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 EHD4Q9H223 541 aa10.38□□□□□ -0.75
PTPRK-212ENST00000434424 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 M0R082 166 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 CLSTN1O94985 981 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 EGFRP00533 1210 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 NASPP49321 788 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-212ENST00000434424 CCDC85BQ15834 202 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-212ENST00000434424 RSPO4Q2I0M5 234 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-212ENST00000434424 JAZF1Q86VZ6 243 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 ZNF417Q8TAU3 575 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 TNFRSF25Q93038 417 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 ZNF587Q96SQ5 575 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-212ENST00000434424 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
PTPRK-212ENST00000434424 NESP48681 1621 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 SMARCA2P51531 1590 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 GBP2P32456 591 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-212ENST00000434424 TYRO3Q06418 890 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 NKAPLQ5M9Q1 402 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 C11orf16Q9NQ32 467 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 ADAMTS1Q9UHI8 967 aa10.36□□□□□ -0.75
PTPRK-212ENST00000434424 ALBP02768 609 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 RLBP1P12271 317 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 GRNP28799 593 aaKnown RBP10.35□□□□□ -0.75
PTPRK-212ENST00000434424 EIF4A3P38919 411 aaKnown RBP10.35□□□□□ -0.75
PTPRK-212ENST00000434424 RAB44Q7Z6P3 723 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-212ENST00000434424 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 MKL1Q969V6 931 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 SPACA7Q96KW9 195 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 PRDM6Q9NQX0 595 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 TPSG1Q9NRR2 321 aa10.35□□□□□ -0.75
PTPRK-212ENST00000434424 EDN3P14138 238 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 SPEM2Q0P670 501 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 FOXD4L6Q3SYB3 417 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-212ENST00000434424 FOXD4L3Q6VB84 417 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-212ENST00000434424 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 GLIS3Q8NEA6 775 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 TMEM74Q96NL1 305 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 ZNF408Q9H9D4 720 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 PPM1HQ9ULR3 514 aa10.34□□□□□ -0.75
PTPRK-212ENST00000434424 A0A1W2PP55 124 aa10.33□□□□□ -0.76
PTPRK-212ENST00000434424 XRCC5P13010 732 aaKnown RBP10.33□□□□□ -0.76
PTPRK-212ENST00000434424 NID1P14543 1247 aa10.33□□□□□ -0.76
PTPRK-212ENST00000434424 FCGRTP55899 365 aa10.33□□□□□ -0.76
PTPRK-212ENST00000434424 SERINC3Q13530 473 aa10.33□□□□□ -0.76
PTPRK-212ENST00000434424 ZNF296Q8WUU4 475 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-212ENST00000434424 STRIP2Q9ULQ0 834 aa10.33□□□□□ -0.76
PTPRK-212ENST00000434424 EFR3BQ9Y2G0 817 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms