RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 LHX6Q9UPM6 363 aa10.68□□□□□ -0.7
CDH13-203ENST00000431540 LAMB1P07942 1786 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 TM4SF4P48230 202 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 INHBEP58166 350 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 KIF23Q02241 960 aaPredicted RBP10.67□□□□□ -0.7
CDH13-203ENST00000431540 GRM1Q13255 1194 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 TBC1D10BQ4KMP7 808 aaPredicted RBP10.67□□□□□ -0.7
CDH13-203ENST00000431540 KSR2Q6VAB6 950 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 CSRNP1Q96S65 589 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 ZNF408Q9H9D4 720 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
CDH13-203ENST00000431540 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
CDH13-203ENST00000431540 TNRC18O15417 2968 aaPredicted RBP10.67□□□□□ -0.7
CDH13-203ENST00000431540 MED23Q9ULK4 1368 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 ECM29Q5VYK3 1845 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 UFL1O94874 794 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 NEXNQ0ZGT2 675 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 SCARF1Q14162 830 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 CCDC27Q2M243 656 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 STRIP1Q5VSL9 837 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 COA1Q9GZY4 146 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 MYOZ2Q9NPC6 264 aa10.66□□□□□ -0.7
CDH13-203ENST00000431540 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
CDH13-203ENST00000431540 NF2P35240 595 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 KRT24Q2M2I5 525 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 CTU1Q7Z7A3 348 aaKnown RBP10.65□□□□□ -0.7
CDH13-203ENST00000431540 TTLL11Q8NHH1 800 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 PLA2G12BQ9BX93 195 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 ANKRD2Q9GZV1 360 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 KCNQ5Q9NR82 932 aa10.65□□□□□ -0.7
CDH13-203ENST00000431540 ZNF646O15015 1829 aaPredicted RBP10.64□□□□□ -0.71
CDH13-203ENST00000431540 SHTN1A0MZ66 631 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 TRPA1O75762 1119 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 ALDH1A1P00352 501 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 RBM26Q5T8P6 1007 aaKnown RBP10.64□□□□□ -0.71
CDH13-203ENST00000431540 SLC51AQ86UW1 340 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 MYD88Q99836 296 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 PHAXQ9H814 394 aaKnown RBP10.64□□□□□ -0.71
CDH13-203ENST00000431540 PRKRIP1Q9H875 184 aaPredicted RBP10.64□□□□□ -0.71
CDH13-203ENST00000431540 SEC31BQ9NQW1 1179 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 GGA3Q9NZ52 723 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 MINPP1Q9UNW1 487 aa10.64□□□□□ -0.71
CDH13-203ENST00000431540 COL1A1P02452 1464 aaPredicted RBP10.63□□□□□ -0.71
CDH13-203ENST00000431540 H7C1W4 665 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 HRO43593 1189 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 EGFRP00533 1210 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 CCT4P50991 539 aaKnown RBP10.63□□□□□ -0.71
CDH13-203ENST00000431540 CTSWP56202 376 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 FKBP1AP62942 108 aaKnown RBP10.63□□□□□ -0.71
CDH13-203ENST00000431540 SREBF2Q12772 1141 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 DDX10Q13206 875 aaKnown RBP10.63□□□□□ -0.71
CDH13-203ENST00000431540 ANGEL2Q5VTE6 544 aaKnown RBP10.63□□□□□ -0.71
CDH13-203ENST00000431540 C15orf52Q6ZUT6 534 aaKnown RBP10.63□□□□□ -0.71
CDH13-203ENST00000431540 MTMR14Q8NCE2 650 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 STK31Q9BXU1 1019 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 HDAC9Q9UKV0 1011 aa10.63□□□□□ -0.71
CDH13-203ENST00000431540 IL16Q14005 1332 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 ADM5C9JUS6 153 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 TK2O00142 265 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 APAF1O14727 1248 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 CSF1RP07333 972 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 DACT2Q5SW24 774 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 APOBEC3FQ8IUX4 373 aaKnown RBP10.62□□□□□ -0.71
CDH13-203ENST00000431540 TSKSQ9UJT2 592 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 PPP2R3BQ9Y5P8 575 aa10.62□□□□□ -0.71
CDH13-203ENST00000431540 PI4KAP2A4QPH2 592 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 WNT10BO00744 389 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 IGHMBP2P38935 993 aaKnown RBP10.61□□□□□ -0.71
CDH13-203ENST00000431540 TTLL5Q6EMB2 1281 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 RASAL3Q86YV0 1011 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 PI4KAP1Q8N8J0 262 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 C8orf58Q8NAV2 365 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 KCTD12Q96CX2 325 aaKnown RBP10.61□□□□□ -0.71
CDH13-203ENST00000431540 MAP3K2Q9Y2U5 619 aa10.61□□□□□ -0.71
CDH13-203ENST00000431540 IGKV5-2P06315 115 aa10.6□□□□□ -0.71
CDH13-203ENST00000431540 RTL5Q5HYW3 569 aaPredicted RBP10.6□□□□□ -0.71
CDH13-203ENST00000431540 LDLRAD1Q5T700 205 aa10.6□□□□□ -0.71
CDH13-203ENST00000431540 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
CDH13-203ENST00000431540 ZBED3Q96IU2 234 aaPredicted RBP10.6□□□□□ -0.71
CDH13-203ENST00000431540 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
CDH13-203ENST00000431540 SPEF2Q9C093 1822 aa10.6□□□□□ -0.71
CDH13-203ENST00000431540 COL4A1P02462 1669 aa10.6□□□□□ -0.71
CDH13-203ENST00000431540 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
CDH13-203ENST00000431540 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
CDH13-203ENST00000431540 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
CDH13-203ENST00000431540 MPHOSPH8Q99549 860 aa10.59□□□□□ -0.71
CDH13-203ENST00000431540 ZNF804BA4D1E1 1349 aa10.58□□□□□ -0.71
CDH13-203ENST00000431540 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
CDH13-203ENST00000431540 GPR25O00155 361 aa10.58□□□□□ -0.72
CDH13-203ENST00000431540 PPP1R12BO60237 982 aaPredicted RBP10.58□□□□□ -0.72
CDH13-203ENST00000431540 GCKRQ14397 625 aa10.58□□□□□ -0.72
CDH13-203ENST00000431540 NBPF9Q3BBW0 867 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms