RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 ZNF157P51786 506 aaPredicted RBP12.81□□□□□ -0.36
HMGN1P38-201ENST00000431116 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
HMGN1P38-201ENST00000431116 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
HMGN1P38-201ENST00000431116 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
HMGN1P38-201ENST00000431116 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
HMGN1P38-201ENST00000431116 FAM155AB1AL88 458 aaPredicted RBP12.8□□□□□ -0.36
HMGN1P38-201ENST00000431116 CA12O43570 354 aa12.8□□□□□ -0.36
HMGN1P38-201ENST00000431116 CCDC102AQ96A19 550 aa12.8□□□□□ -0.36
HMGN1P38-201ENST00000431116 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
HMGN1P38-201ENST00000431116 UTYO14607 1347 aa12.8□□□□□ -0.36
HMGN1P38-201ENST00000431116 SLC10A3P09131 477 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 MMP14P50281 582 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 FKBP1BP68106 108 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 PRAMEF18Q5VWM3 479 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 CERS5Q8N5B7 392 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 JAG2Q9Y219 1238 aa12.79□□□□□ -0.36
HMGN1P38-201ENST00000431116 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 IL1R1P14778 569 aa12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 KIF23Q02241 960 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 APOBEC3FQ8IUX4 373 aaKnown RBP12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 PUS3Q9BZE2 481 aaKnown RBP12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
HMGN1P38-201ENST00000431116 CCER2I3L3R5 266 aa12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 NF2P35240 595 aa12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 MOB2Q70IA6 237 aa12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 RASAL3Q86YV0 1011 aa12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 ZBED3Q96IU2 234 aaPredicted RBP12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
HMGN1P38-201ENST00000431116 GYG1P46976 350 aa12.76□□□□□ -0.37
HMGN1P38-201ENST00000431116 UBE4AQ14139 1066 aa12.76□□□□□ -0.37
HMGN1P38-201ENST00000431116 DLGAP5Q15398 846 aa12.76□□□□□ -0.37
HMGN1P38-201ENST00000431116 ABHD8Q96I13 439 aa12.76□□□□□ -0.37
HMGN1P38-201ENST00000431116 UBE2Q2LH0YL09 131 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 FKBP1AP62942 108 aaKnown RBP12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 KLHDC4Q8TBB5 520 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 PCDHAC2Q9Y5I4 1007 aa12.75□□□□□ -0.37
HMGN1P38-201ENST00000431116 FAM205AQ6ZU69 1335 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 MYO1BO43795 1136 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 PRKG1Q13976 671 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 METTL24Q5JXM2 366 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 TDRD7Q8NHU6 1098 aaKnown RBP12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 FAM84BQ96KN1 310 aaPredicted RBP12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 SAGE1Q9NXZ1 904 aa12.74□□□□□ -0.37
HMGN1P38-201ENST00000431116 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 OTOFQ9HC10 1997 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 CLRN2A0PK11 232 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 TRPA1O75762 1119 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 VPS37DQ86XT2 251 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 DEFB129Q9H1M3 183 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 IQSEC3Q9UPP2 1182 aaPredicted RBP12.73□□□□□ -0.37
HMGN1P38-201ENST00000431116 AOX1Q06278 1338 aa12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 ARMC9Q7Z3E5 817 aa12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 VGLL2Q8N8G2 317 aa12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 PRMT6Q96LA8 375 aaPredicted RBP12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 ANGEL1Q9UNK9 670 aaKnown RBP12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 PPP2R3BQ9Y5P8 575 aa12.72□□□□□ -0.37
HMGN1P38-201ENST00000431116 LAMB1P07942 1786 aa12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 PDE8BO95263 885 aa12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 CHAF1AQ13111 956 aaPredicted RBP12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 MCOLN1Q9GZU1 580 aa12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 FZD1Q9UP38 647 aa12.71□□□□□ -0.37
HMGN1P38-201ENST00000431116 EYA2O00167 538 aa12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 RFX5P48382 616 aaPredicted RBP12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 DGKZQ13574 1117 aa12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 SERPINA10Q9UK55 444 aa12.7□□□□□ -0.38
HMGN1P38-201ENST00000431116 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
HMGN1P38-201ENST00000431116 CCDC85CA6NKD9 419 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms