RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 SHTN1A0MZ66 631 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 YDJCA8MPS7 323 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 FAM155AB1AL88 458 aaPredicted RBP10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 BCAMP50895 628 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 SREBF2Q12772 1141 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 TCIRG1Q13488 830 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
ECHDC1-207ENST00000430841 UFL1O94874 794 aa10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 ANXA1P04083 346 aa10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 ANGEL2Q5VTE6 544 aaKnown RBP10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 COPS6Q7L5N1 327 aa10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 RASAL3Q86YV0 1011 aa10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
ECHDC1-207ENST00000430841 COL9A1P20849 921 aa10.19□□□□□ -0.78
ECHDC1-207ENST00000430841 OGFOD1Q8N543 542 aa10.19□□□□□ -0.78
ECHDC1-207ENST00000430841 CSRNP1Q96S65 589 aa10.19□□□□□ -0.78
ECHDC1-207ENST00000430841 GGA1Q9UJY5 639 aa10.19□□□□□ -0.78
ECHDC1-207ENST00000430841 POLR2AP24928 1970 aaKnown RBP10.19□□□□□ -0.78
ECHDC1-207ENST00000430841 DUOX1Q9NRD9 1551 aa10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 GPSM2P81274 684 aa10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 SCARF1Q14162 830 aa10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 FBXO46Q6PJ61 603 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 DLK2Q6UY11 383 aa10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 ZNF428Q96B54 188 aa10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 LAS1LQ9Y4W2 734 aaKnown RBP10.18□□□□□ -0.78
ECHDC1-207ENST00000430841 TAF1P21675 1872 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 PITPNM2Q9BZ72 1349 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 FKTNO75072 461 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 TBC1D8O95759 1140 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 USP17L8P0C7I0 530 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 RIPK4P57078 832 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 RSBN1LQ6PCB5 846 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 ARMC9Q7Z3E5 817 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 AGBL3Q8NEM8 1001 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 ZNF296Q8WUU4 475 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
ECHDC1-207ENST00000430841 IRS4O14654 1257 aaPredicted RBP10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 ALDH1A1P00352 501 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 EGFRP00533 1210 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 RPS8P62241 208 aaKnown RBP10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 PROSER3Q2NL68 480 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 CCDC152Q4G0S7 254 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 PLBD2Q8NHP8 589 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 TBC1D16Q8TBP0 767 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 CELF1Q92879 486 aaKnown RBP10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 FAM89AQ96GI7 184 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 MYOZ2Q9NPC6 264 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 POLLQ9UGP5 575 aa10.16□□□□□ -0.78
ECHDC1-207ENST00000430841 RTL9Q8NET4 1388 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 USP17L3A6NCW0 530 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 USP17L4A6NCW7 530 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 GPR25O00155 361 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 VIL1P09327 827 aaKnown RBP10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 SF3B3Q15393 1217 aaKnown RBP10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 USP17L1Q7RTZ2 530 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 RIC3Q7Z5B4 369 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 ZDHHC16Q969W1 377 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 CHPF2Q9P2E5 772 aa10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 DBF4Q9UBU7 674 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-207ENST00000430841 XDHP47989 1333 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 MYO3BQ8WXR4 1341 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 UBE2Q2LH0YL09 131 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 PDIA6Q15084 440 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 INTS3Q68E01 1043 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 TRAF7Q6Q0C0 670 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 APOBEC3FQ8IUX4 373 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 ANKRD18AQ8IVF6 992 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 HYPKQ9NX55 129 aa10.14□□□□□ -0.79
ECHDC1-207ENST00000430841 ASTN2O75129 1339 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 ZNF280AP59817 542 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 PRKG1Q13976 671 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 OTUD7BQ6GQQ9 843 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 CDC5LQ99459 802 aaKnown RBP10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 KCNQ5Q9NR82 932 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 TRIM17Q9Y577 477 aa10.13□□□□□ -0.79
ECHDC1-207ENST00000430841 EVI5O60447 810 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 DDX58O95786 925 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 ARHGEF6Q15052 776 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 PODNQ7Z5L7 613 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 ERO1AQ96HE7 468 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 PLEKHF1Q96S99 279 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 CHMP4AQ9BY43 222 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 ZNF609O15014 1411 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 PSME4Q14997 1843 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 SCN9AQ15858 1988 aa10.12□□□□□ -0.79
ECHDC1-207ENST00000430841 MANSC4A6NHS7 340 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 WDHD1O75717 1129 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms