RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 PTPRCP08575 1304 aa20.57■□□□□ 0.88
PTPRA-206ENST00000430705 PLIN1O60240 522 aa20.57■□□□□ 0.88
PTPRA-206ENST00000430705 FKBP1BP68106 108 aa20.57■□□□□ 0.88
PTPRA-206ENST00000430705 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
PTPRA-206ENST00000430705 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
PTPRA-206ENST00000430705 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
PTPRA-206ENST00000430705 RIPOR2Q9Y4F9 1068 aa20.56■□□□□ 0.88
PTPRA-206ENST00000430705 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
PTPRA-206ENST00000430705 AKAP11Q9UKA4 1901 aa20.55■□□□□ 0.88
PTPRA-206ENST00000430705 UBE2Q2LH0YL09 131 aa20.55■□□□□ 0.88
PTPRA-206ENST00000430705 MMP14P50281 582 aa20.55■□□□□ 0.88
PTPRA-206ENST00000430705 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
PTPRA-206ENST00000430705 FKBP1AP62942 108 aaKnown RBP20.54■□□□□ 0.88
PTPRA-206ENST00000430705 LRRC24Q50LG9 513 aa20.54■□□□□ 0.88
PTPRA-206ENST00000430705 CSRNP1Q96S65 589 aa20.54■□□□□ 0.88
PTPRA-206ENST00000430705 USP44Q9H0E7 712 aa20.54■□□□□ 0.88
PTPRA-206ENST00000430705 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
PTPRA-206ENST00000430705 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
PTPRA-206ENST00000430705 GYG1P46976 350 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 UBE4AQ14139 1066 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 APOBEC3FQ8IUX4 373 aaKnown RBP20.53■□□□□ 0.88
PTPRA-206ENST00000430705 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 TDRD7Q8NHU6 1098 aaKnown RBP20.53■□□□□ 0.88
PTPRA-206ENST00000430705 FAM84BQ96KN1 310 aaPredicted RBP20.53■□□□□ 0.88
PTPRA-206ENST00000430705 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 SAGE1Q9NXZ1 904 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 LAMB1P07942 1786 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 FAM205AQ6ZU69 1335 aa20.53■□□□□ 0.88
PTPRA-206ENST00000430705 ALDH1L2Q3SY69 923 aa20.52■□□□□ 0.88
PTPRA-206ENST00000430705 KLHDC4Q8TBB5 520 aa20.52■□□□□ 0.88
PTPRA-206ENST00000430705 FZD1Q9UP38 647 aa20.52■□□□□ 0.88
PTPRA-206ENST00000430705 SPDYE2BA6NHP3 402 aa20.51■□□□□ 0.87
PTPRA-206ENST00000430705 SPDYE6P0CI01 402 aa20.51■□□□□ 0.87
PTPRA-206ENST00000430705 DLGAP5Q15398 846 aa20.51■□□□□ 0.87
PTPRA-206ENST00000430705 CFAP100Q494V2 611 aa20.51■□□□□ 0.87
PTPRA-206ENST00000430705 MCOLN1Q9GZU1 580 aa20.51■□□□□ 0.87
PTPRA-206ENST00000430705 MROH5Q6ZUA9 1318 aa20.51■□□□□ 0.87
PTPRA-206ENST00000430705 OTOFQ9HC10 1997 aa20.5■□□□□ 0.87
PTPRA-206ENST00000430705 PRMT6Q96LA8 375 aaPredicted RBP20.5■□□□□ 0.87
PTPRA-206ENST00000430705 CLRN2A0PK11 232 aa20.49■□□□□ 0.87
PTPRA-206ENST00000430705 TRPA1O75762 1119 aa20.49■□□□□ 0.87
PTPRA-206ENST00000430705 RFX5P48382 616 aaPredicted RBP20.49■□□□□ 0.87
PTPRA-206ENST00000430705 PTPN12Q05209 780 aaKnown RBP20.49■□□□□ 0.87
PTPRA-206ENST00000430705 GRIK5Q16478 980 aa20.49■□□□□ 0.87
PTPRA-206ENST00000430705 DEFB129Q9H1M3 183 aa20.49■□□□□ 0.87
PTPRA-206ENST00000430705 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
PTPRA-206ENST00000430705 HIBADHP31937 336 aaKnown RBP20.48■□□□□ 0.87
PTPRA-206ENST00000430705 PRKG1Q13976 671 aa20.48■□□□□ 0.87
PTPRA-206ENST00000430705 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
PTPRA-206ENST00000430705 TTLL12Q14166 644 aaPredicted RBP20.47■□□□□ 0.87
PTPRA-206ENST00000430705 MFSD14BQ5SR56 506 aa20.47■□□□□ 0.87
PTPRA-206ENST00000430705 LDLRAD1Q5T700 205 aa20.47■□□□□ 0.87
PTPRA-206ENST00000430705 FBXO33Q7Z6M2 555 aa20.47■□□□□ 0.87
PTPRA-206ENST00000430705 NF2P35240 595 aa20.46■□□□□ 0.87
PTPRA-206ENST00000430705 METTL24Q5JXM2 366 aa20.46■□□□□ 0.87
PTPRA-206ENST00000430705 IQSEC3Q9UPP2 1182 aaPredicted RBP20.46■□□□□ 0.87
PTPRA-206ENST00000430705 PDE8BO95263 885 aa20.45■□□□□ 0.86
PTPRA-206ENST00000430705 FGFR2P21802 821 aa20.45■□□□□ 0.86
PTPRA-206ENST00000430705 MKRN3Q13064 507 aaKnown RBP20.45■□□□□ 0.86
PTPRA-206ENST00000430705 DGKZQ13574 1117 aa20.45■□□□□ 0.86
PTPRA-206ENST00000430705 MAP3K11Q16584 847 aa20.44■□□□□ 0.86
PTPRA-206ENST00000430705 SPDYE2Q495Y8 402 aa20.44■□□□□ 0.86
PTPRA-206ENST00000430705 CDAN1Q8IWY9 1227 aa20.44■□□□□ 0.86
PTPRA-206ENST00000430705 VEZTQ9HBM0 779 aa20.44■□□□□ 0.86
PTPRA-206ENST00000430705 ANGEL1Q9UNK9 670 aaKnown RBP20.44■□□□□ 0.86
PTPRA-206ENST00000430705 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
PTPRA-206ENST00000430705 PPP2R3BQ9Y5P8 575 aa20.44■□□□□ 0.86
PTPRA-206ENST00000430705 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
PTPRA-206ENST00000430705 TNRC18O15417 2968 aaPredicted RBP20.43■□□□□ 0.86
PTPRA-206ENST00000430705 NBPF12Q5TAG4 269 aaPredicted RBP20.43■□□□□ 0.86
PTPRA-206ENST00000430705 ARMC9Q7Z3E5 817 aa20.43■□□□□ 0.86
PTPRA-206ENST00000430705 REM2Q8IYK8 340 aaPredicted RBP20.43■□□□□ 0.86
PTPRA-206ENST00000430705 CLMNQ96JQ2 1002 aa20.43■□□□□ 0.86
PTPRA-206ENST00000430705 SERPINA10Q9UK55 444 aa20.43■□□□□ 0.86
PTPRA-206ENST00000430705 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
PTPRA-206ENST00000430705 HTTP42858 3142 aa20.42■□□□□ 0.86
PTPRA-206ENST00000430705 CCDC85CA6NKD9 419 aa20.42■□□□□ 0.86
PTPRA-206ENST00000430705 CT47B1P0C2W7 299 aaPredicted RBP20.42■□□□□ 0.86
PTPRA-206ENST00000430705 TM4SF4P48230 202 aa20.42■□□□□ 0.86
PTPRA-206ENST00000430705 BCAMP50895 628 aa20.42■□□□□ 0.86
PTPRA-206ENST00000430705 SPRYD7Q5W111 196 aa20.42■□□□□ 0.86
PTPRA-206ENST00000430705 ATG9AQ7Z3C6 839 aa20.42■□□□□ 0.86
PTPRA-206ENST00000430705 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
PTPRA-206ENST00000430705 EYA2O00167 538 aa20.41■□□□□ 0.86
PTPRA-206ENST00000430705 CRKP46108 304 aa20.41■□□□□ 0.86
PTPRA-206ENST00000430705 RBM5P52756 815 aaKnown RBP eCLIP20.41■□□□□ 0.86
PTPRA-206ENST00000430705 CHAF1AQ13111 956 aaPredicted RBP20.41■□□□□ 0.86
PTPRA-206ENST00000430705 RASA3Q14644 834 aa20.41■□□□□ 0.86
PTPRA-206ENST00000430705 TDRD3Q9H7E2 651 aaKnown RBP20.41■□□□□ 0.86
PTPRA-206ENST00000430705 KIF16BQ96L93 1317 aa20.41■□□□□ 0.86
PTPRA-206ENST00000430705 MYO1BO43795 1136 aa20.4■□□□□ 0.86
PTPRA-206ENST00000430705 RARSP54136 660 aaKnown RBP20.4■□□□□ 0.86
PTPRA-206ENST00000430705 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
PTPRA-206ENST00000430705 DZIP1LQ8IYY4 767 aaKnown RBP20.4■□□□□ 0.86
PTPRA-206ENST00000430705 TEPSINQ96N21 525 aa20.4■□□□□ 0.86
PTPRA-206ENST00000430705 TBC1D8O95759 1140 aa20.39■□□□□ 0.85
PTPRA-206ENST00000430705 GJA5P36382 358 aa20.39■□□□□ 0.85
PTPRA-206ENST00000430705 R3HDMLQ9H3Y0 253 aa20.39■□□□□ 0.85
PTPRA-206ENST00000430705 USP2O75604 605 aaPredicted RBP20.38■□□□□ 0.85
PTPRA-206ENST00000430705 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms