RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 COL14A1Q05707 1796 aaKnown RBP17.54■□□□□ 0.4
LINC00839-202ENST00000429940 A0A0G2JLW4 131 aa17.53■□□□□ 0.4
LINC00839-202ENST00000429940 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
LINC00839-202ENST00000429940 ERCC4Q92889 916 aaPredicted RBP17.53■□□□□ 0.4
LINC00839-202ENST00000429940 FBXW7Q969H0 707 aa17.53■□□□□ 0.4
LINC00839-202ENST00000429940 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.4
LINC00839-202ENST00000429940 CASP7P55210 303 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 CHST3Q7LGC8 479 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 MRPS27Q92552 414 aaKnown RBP17.52■□□□□ 0.4
LINC00839-202ENST00000429940 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.4
LINC00839-202ENST00000429940 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 IL2RBP14784 551 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
LINC00839-202ENST00000429940 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
LINC00839-202ENST00000429940 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
LINC00839-202ENST00000429940 BCL11BQ9C0K0 894 aaPredicted RBP17.51■□□□□ 0.39
LINC00839-202ENST00000429940 TRMT1Q9NXH9 659 aaKnown RBP17.51■□□□□ 0.39
LINC00839-202ENST00000429940 PLCH1Q4KWH8 1693 aa17.51■□□□□ 0.39
LINC00839-202ENST00000429940 CCAR2Q8N163 923 aaKnown RBP17.51■□□□□ 0.39
LINC00839-202ENST00000429940 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
LINC00839-202ENST00000429940 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
LINC00839-202ENST00000429940 MAST3O60307 1309 aa17.51■□□□□ 0.39
LINC00839-202ENST00000429940 GSDMDP57764 484 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 TIMM10P62072 90 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 FOXO4P98177 505 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 ATG9AQ7Z3C6 839 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 ZCRB1Q8TBF4 217 aaKnown RBP17.5■□□□□ 0.39
LINC00839-202ENST00000429940 RTEL1Q9NZ71 1219 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 A0A1B0GVL5 298 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 KIF20AO95235 890 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 ADALQ6DHV7 355 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
LINC00839-202ENST00000429940 DDX41Q9UJV9 622 aaKnown RBP17.5■□□□□ 0.39
LINC00839-202ENST00000429940 ZNF215Q9UL58 517 aaPredicted RBP17.5■□□□□ 0.39
LINC00839-202ENST00000429940 LRP6O75581 1613 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 FDPSP14324 419 aaKnown RBP17.49■□□□□ 0.39
LINC00839-202ENST00000429940 ZRSR1Q15695 479 aaKnown RBP17.49■□□□□ 0.39
LINC00839-202ENST00000429940 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 A0A1W2PQ27 194 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 A0A1W2PQ64 194 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 A0A1W2PQD8 194 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 RNF113AO15541 343 aaKnown RBP17.49■□□□□ 0.39
LINC00839-202ENST00000429940 NDUFA8P51970 172 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 NBPF11Q86T75 865 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 KCND1Q9NSA2 647 aa17.49■□□□□ 0.39
LINC00839-202ENST00000429940 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
LINC00839-202ENST00000429940 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
LINC00839-202ENST00000429940 KIF18AQ8NI77 898 aa17.48■□□□□ 0.39
LINC00839-202ENST00000429940 IMPACTQ9P2X3 320 aa17.48■□□□□ 0.39
LINC00839-202ENST00000429940 M0R2C6 588 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 IL15P40933 162 aaPredicted RBP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 STK38Q15208 465 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 TTLL5Q6EMB2 1281 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 OSBPL5Q9H0X9 879 aaPredicted RBP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 KIAA1468Q9P260 1216 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 H7C1W4 665 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 ZNF397Q8NF99 534 aaPredicted RBP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 CLIC4Q9Y696 253 aa17.47■□□□□ 0.39
LINC00839-202ENST00000429940 V9GYY5 206 aaPredicted RBP17.47■□□□□ 0.39
LINC00839-202ENST00000429940 IGSF3O75054 1194 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 KCNG4Q8TDN1 519 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 BPIFA3Q9BQP9 254 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 MORC2Q9Y6X9 1032 aaPredicted RBP17.46■□□□□ 0.39
LINC00839-202ENST00000429940 KIF2AO00139 706 aaPredicted RBP17.46■□□□□ 0.39
LINC00839-202ENST00000429940 SMC2O95347 1197 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 FBXL16Q8N461 479 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
LINC00839-202ENST00000429940 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
LINC00839-202ENST00000429940 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
LINC00839-202ENST00000429940 EVCP57679 992 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 EP400Q96L91 3159 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 SPEF2Q9C093 1822 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 YEATS4O95619 227 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 KMT5BQ4FZB7 885 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 CCDC150Q8NCX0 1101 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 XPO4Q9C0E2 1151 aaKnown RBP17.45■□□□□ 0.38
LINC00839-202ENST00000429940 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
LINC00839-202ENST00000429940 IFNKQ9P0W0 207 aa17.45■□□□□ 0.38
LINC00839-202ENST00000429940 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 A0A1B0GUL7 405 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 SPTLC2O15270 562 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 SLU7O95391 586 aaKnown RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 CABP4P57796 275 aa17.44■□□□□ 0.38
LINC00839-202ENST00000429940 MEX3CQ5U5Q3 659 aaKnown RBP17.44■□□□□ 0.38
LINC00839-202ENST00000429940 TMC6Q7Z403 805 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms