RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 DBNDD2Q9BQY9 259 aa18.35■□□□□ 0.53
GARNL3-204ENST00000429629 MRIQ9BWK5 157 aa18.35■□□□□ 0.53
GARNL3-204ENST00000429629 GPRC5DQ9NZD1 345 aa18.35■□□□□ 0.53
GARNL3-204ENST00000429629 DBNLQ9UJU6 430 aaKnown RBP18.35■□□□□ 0.53
GARNL3-204ENST00000429629 SALL1Q9NSC2 1324 aa18.34■□□□□ 0.53
GARNL3-204ENST00000429629 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
GARNL3-204ENST00000429629 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
GARNL3-204ENST00000429629 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
GARNL3-204ENST00000429629 ZNF280AP59817 542 aaPredicted RBP18.34■□□□□ 0.53
GARNL3-204ENST00000429629 AACSQ86V21 672 aa18.34■□□□□ 0.53
GARNL3-204ENST00000429629 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
GARNL3-204ENST00000429629 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
GARNL3-204ENST00000429629 H7C1D1 291 aa18.33■□□□□ 0.52
GARNL3-204ENST00000429629 IGHDP01880 384 aa18.33■□□□□ 0.52
GARNL3-204ENST00000429629 PNMA8AQ86V59 439 aaPredicted RBP18.33■□□□□ 0.52
GARNL3-204ENST00000429629 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
GARNL3-204ENST00000429629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.52
GARNL3-204ENST00000429629 CCDC8Q9H0W5 538 aaPredicted RBP18.33■□□□□ 0.52
GARNL3-204ENST00000429629 CNOT7Q9UIV1 285 aaKnown RBP18.33■□□□□ 0.52
GARNL3-204ENST00000429629 USP17L8P0C7I0 530 aa18.32■□□□□ 0.52
GARNL3-204ENST00000429629 OGFOD1Q8N543 542 aa18.32■□□□□ 0.52
GARNL3-204ENST00000429629 RRAGCQ9HB90 399 aa18.32■□□□□ 0.52
GARNL3-204ENST00000429629 ADARB2Q9NS39 739 aaKnown RBP18.32■□□□□ 0.52
GARNL3-204ENST00000429629 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
GARNL3-204ENST00000429629 SPEF2Q9C093 1822 aa18.31■□□□□ 0.52
GARNL3-204ENST00000429629 APBB1O00213 710 aa18.31■□□□□ 0.52
GARNL3-204ENST00000429629 HDLBPQ00341 1268 aaKnown RBP18.31■□□□□ 0.52
GARNL3-204ENST00000429629 MFSD14BQ5SR56 506 aa18.31■□□□□ 0.52
GARNL3-204ENST00000429629 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-204ENST00000429629 TAF1DQ9H5J8 278 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-204ENST00000429629 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-204ENST00000429629 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 TTC39AQ5SRH9 613 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
GARNL3-204ENST00000429629 CERS5Q8N5B7 392 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 SPATA5Q8NB90 893 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
GARNL3-204ENST00000429629 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
GARNL3-204ENST00000429629 KIF3CO14782 793 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 ATP5JP18859 108 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 EPHX2P34913 555 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 EPS15P42566 896 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 NUCB1Q02818 461 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 ANKRD45Q5TZF3 282 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-204ENST00000429629 MICALL2Q8IY33 904 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 MTMR14Q8NCE2 650 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
GARNL3-204ENST00000429629 IQSEC3Q9UPP2 1182 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-204ENST00000429629 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
GARNL3-204ENST00000429629 ZNF526Q8TF50 670 aaPredicted RBP18.28■□□□□ 0.52
GARNL3-204ENST00000429629 PGAP2Q9UHJ9 254 aa18.28■□□□□ 0.52
GARNL3-204ENST00000429629 TIAM2Q8IVF5 1701 aa18.28■□□□□ 0.52
GARNL3-204ENST00000429629 MAST3O60307 1309 aa18.27■□□□□ 0.52
GARNL3-204ENST00000429629 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.52
GARNL3-204ENST00000429629 MCAMP43121 646 aa18.27■□□□□ 0.52
GARNL3-204ENST00000429629 CHAF1AQ13111 956 aaPredicted RBP18.27■□□□□ 0.52
GARNL3-204ENST00000429629 FBXW7Q969H0 707 aa18.27■□□□□ 0.52
GARNL3-204ENST00000429629 GPATCH3Q96I76 525 aa18.27■□□□□ 0.52
GARNL3-204ENST00000429629 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.52
GARNL3-204ENST00000429629 SERPINA10Q9UK55 444 aa18.27■□□□□ 0.52
GARNL3-204ENST00000429629 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
GARNL3-204ENST00000429629 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
GARNL3-204ENST00000429629 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
GARNL3-204ENST00000429629 MXD3Q9BW11 206 aa18.26■□□□□ 0.51
GARNL3-204ENST00000429629 STAP2Q9UGK3 403 aa18.26■□□□□ 0.51
GARNL3-204ENST00000429629 TOMM70O94826 608 aa18.25■□□□□ 0.51
GARNL3-204ENST00000429629 SCARF1Q14162 830 aa18.25■□□□□ 0.51
GARNL3-204ENST00000429629 HHIPL2Q6UWX4 724 aa18.25■□□□□ 0.51
GARNL3-204ENST00000429629 LDHDQ86WU2 507 aa18.25■□□□□ 0.51
GARNL3-204ENST00000429629 KIAA0825Q8IV33 1275 aa18.25■□□□□ 0.51
GARNL3-204ENST00000429629 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
GARNL3-204ENST00000429629 ZBED3Q96IU2 234 aaPredicted RBP18.25■□□□□ 0.51
GARNL3-204ENST00000429629 MYOZ2Q9NPC6 264 aa18.25■□□□□ 0.51
GARNL3-204ENST00000429629 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
GARNL3-204ENST00000429629 TTF1Q15361 905 aaPredicted RBP18.24■□□□□ 0.51
GARNL3-204ENST00000429629 SLF2Q8IX21 1173 aa18.24■□□□□ 0.51
GARNL3-204ENST00000429629 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
GARNL3-204ENST00000429629 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
GARNL3-204ENST00000429629 TTF2Q9UNY4 1162 aaKnown RBP18.24■□□□□ 0.51
GARNL3-204ENST00000429629 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
GARNL3-204ENST00000429629 COL1A1P02452 1464 aaPredicted RBP18.23■□□□□ 0.51
GARNL3-204ENST00000429629 ERC2O15083 957 aa18.23■□□□□ 0.51
GARNL3-204ENST00000429629 CYP2E1P05181 493 aaPredicted RBP18.23■□□□□ 0.51
GARNL3-204ENST00000429629 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
GARNL3-204ENST00000429629 HAUS7Q99871 368 aa18.23■□□□□ 0.51
GARNL3-204ENST00000429629 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
GARNL3-204ENST00000429629 SCN9AQ15858 1988 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 MX1P20591 662 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 ZAP70P43403 619 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
GARNL3-204ENST00000429629 DLGAP5Q15398 846 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 KIF4BQ2VIQ3 1234 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 SAMD7Q7Z3H4 446 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms