RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PODXL2Q9NZ53 605 aa10.76□□□□□ -0.69
SMC6-204ENST00000428868 JAG2Q9Y219 1238 aa10.76□□□□□ -0.69
SMC6-204ENST00000428868 LEMD3Q9Y2U8 911 aa10.76□□□□□ -0.69
SMC6-204ENST00000428868 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
SMC6-204ENST00000428868 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
SMC6-204ENST00000428868 C7orf43Q8WVR3 580 aa10.75□□□□□ -0.69
SMC6-204ENST00000428868 USP26Q9BXU7 913 aa10.75□□□□□ -0.69
SMC6-204ENST00000428868 C22orf23Q9BZE7 217 aa10.75□□□□□ -0.69
SMC6-204ENST00000428868 LSG1Q9H089 658 aaKnown RBP10.75□□□□□ -0.69
SMC6-204ENST00000428868 GGA1Q9UJY5 639 aa10.75□□□□□ -0.69
SMC6-204ENST00000428868 MYH1P12882 1939 aa10.75□□□□□ -0.69
SMC6-204ENST00000428868 M0R2C6 588 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 RIMBP2O15034 1052 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 ATP2B4P23634 1241 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 POLD1P28340 1107 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 HIBADHP31937 336 aaKnown RBP10.74□□□□□ -0.69
SMC6-204ENST00000428868 PTH1RQ03431 593 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
SMC6-204ENST00000428868 TMC4Q7Z404 712 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 KIF2CQ99661 725 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 MAST3O60307 1309 aa10.74□□□□□ -0.69
SMC6-204ENST00000428868 DDX60LQ5H9U9 1706 aaKnown RBP10.73□□□□□ -0.69
SMC6-204ENST00000428868 C6orf229H3BNL8 230 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 RNF113AO15541 343 aaKnown RBP10.73□□□□□ -0.69
SMC6-204ENST00000428868 ADD2P35612 726 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 CHAF1AQ13111 956 aaPredicted RBP10.73□□□□□ -0.69
SMC6-204ENST00000428868 GRIK5Q16478 980 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 CAVIN4Q5BKX8 364 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 ZMYM1Q5SVZ6 1142 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 VPS37DQ86XT2 251 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 MPNDQ8N594 471 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 ZNF384Q8TF68 577 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 OSBP2Q969R2 916 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 PALD1Q9ULE6 856 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 MYH8P13535 1937 aa10.73□□□□□ -0.69
SMC6-204ENST00000428868 TCRBV5S4A2TA0A5A2 114 aa10.72□□□□□ -0.69
SMC6-204ENST00000428868 C21orf2O43822 256 aa10.72□□□□□ -0.69
SMC6-204ENST00000428868 IDH1O75874 414 aaKnown RBP10.72□□□□□ -0.69
SMC6-204ENST00000428868 PDE6AP16499 860 aa10.72□□□□□ -0.69
SMC6-204ENST00000428868 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
SMC6-204ENST00000428868 DPP8Q6V1X1 898 aaPredicted RBP10.72□□□□□ -0.69
SMC6-204ENST00000428868 NLGN2Q8NFZ4 835 aa10.72□□□□□ -0.69
SMC6-204ENST00000428868 TDRD7Q8NHU6 1098 aaKnown RBP10.72□□□□□ -0.69
SMC6-204ENST00000428868 PUS7LQ9H0K6 701 aaKnown RBP10.72□□□□□ -0.69
SMC6-204ENST00000428868 CCDC171Q6TFL3 1326 aa10.72□□□□□ -0.69
SMC6-204ENST00000428868 RAD50Q92878 1312 aa10.72□□□□□ -0.69
SMC6-204ENST00000428868 HIP1O00291 1037 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 FOXP2O15409 715 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 REC8O95072 547 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 C1QTNF8P60827 252 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 WASHC4Q2M389 1173 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 VPS53Q5VIR6 699 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 ZNF804AQ7Z570 1209 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 TIAM2Q8IVF5 1701 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 MAGEB6Q8N7X4 407 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 TTLL6Q8N841 843 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 UPF2Q9HAU5 1272 aaKnown RBP10.71□□□□□ -0.69
SMC6-204ENST00000428868 ZNF532Q9HCE3 1301 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 CD209Q9NNX6 404 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 GNL3LQ9NVN8 582 aaKnown RBP10.71□□□□□ -0.69
SMC6-204ENST00000428868 DENND2AQ9ULE3 1009 aa10.71□□□□□ -0.69
SMC6-204ENST00000428868 PDS5AQ29RF7 1337 aaKnown RBP10.7□□□□□ -0.7
SMC6-204ENST00000428868 IL1R1P14778 569 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 PRDX5P30044 214 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 TTF1Q15361 905 aaPredicted RBP10.7□□□□□ -0.7
SMC6-204ENST00000428868 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 MCMDC2Q4G0Z9 681 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 SLC9C2Q5TAH2 1124 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 RUFY2Q8WXA3 655 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 HELLSQ9NRZ9 838 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 ABCF2Q9UG63 623 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 TAF6LQ9Y6J9 622 aa10.7□□□□□ -0.7
SMC6-204ENST00000428868 SEMA3EO15041 775 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 FRAT2O75474 233 aaPredicted RBP10.69□□□□□ -0.7
SMC6-204ENST00000428868 TGFB2P61812 414 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
SMC6-204ENST00000428868 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 APPBP2Q92624 585 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 MXD3Q9BW11 206 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 RTFDC1Q9BY42 306 aaPredicted RBP10.69□□□□□ -0.7
SMC6-204ENST00000428868 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 KCNQ5Q9NR82 932 aa10.69□□□□□ -0.7
SMC6-204ENST00000428868 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
SMC6-204ENST00000428868 SIPA1L1O43166 1804 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 ZBTB22O15209 634 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 CD2BP2O95400 341 aaKnown RBP10.68□□□□□ -0.7
SMC6-204ENST00000428868 HSPA4P34932 840 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
SMC6-204ENST00000428868 UBE3CQ15386 1083 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 AOC3Q16853 763 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 MAP4K1Q92918 833 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMC6-204ENST00000428868 RAI14Q9P0K7 980 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 LRP2BPQ9P2M1 347 aa10.68□□□□□ -0.7
SMC6-204ENST00000428868 CD2APQ9Y5K6 639 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms