RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HIBADHP31937 336 aaKnown RBP11.38□□□□□ -0.59
SMC1A-203ENST00000428014 FKBP1BP68106 108 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 PDE3AQ14432 1141 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
SMC1A-203ENST00000428014 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 ZBED3Q96IU2 234 aaPredicted RBP11.38□□□□□ -0.59
SMC1A-203ENST00000428014 MEIS3Q99687 375 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 HIRAP54198 1017 aaPredicted RBP11.37□□□□□ -0.59
SMC1A-203ENST00000428014 KIF4BQ2VIQ3 1234 aa11.37□□□□□ -0.59
SMC1A-203ENST00000428014 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
SMC1A-203ENST00000428014 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
SMC1A-203ENST00000428014 FTSJ3Q8IY81 847 aaKnown RBP11.37□□□□□ -0.59
SMC1A-203ENST00000428014 FAM84BQ96KN1 310 aaPredicted RBP11.37□□□□□ -0.59
SMC1A-203ENST00000428014 MYOZ2Q9NPC6 264 aa11.37□□□□□ -0.59
SMC1A-203ENST00000428014 GPR108Q9NPR9 543 aa11.37□□□□□ -0.59
SMC1A-203ENST00000428014 AKAP2Q9Y2D5 859 aa11.37□□□□□ -0.59
SMC1A-203ENST00000428014 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
SMC1A-203ENST00000428014 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-203ENST00000428014 TAF5LO75529 589 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-203ENST00000428014 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-203ENST00000428014 ZNF594Q96JF6 807 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-203ENST00000428014 PUS3Q9BZE2 481 aaKnown RBP11.36□□□□□ -0.59
SMC1A-203ENST00000428014 KCNQ5Q9NR82 932 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-203ENST00000428014 PPP2R3BQ9Y5P8 575 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
SMC1A-203ENST00000428014 MAST3O60307 1309 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 SLC5A1P13866 664 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 NUBP1P53384 320 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 LRRC24Q50LG9 513 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 MAP1SQ66K74 1059 aaPredicted RBP11.35□□□□□ -0.59
SMC1A-203ENST00000428014 TMED8Q6PL24 325 aaPredicted RBP11.35□□□□□ -0.59
SMC1A-203ENST00000428014 TMEM57Q8N5G2 664 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 TRPM4Q8TD43 1214 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
SMC1A-203ENST00000428014 GPR101Q96P66 508 aaPredicted RBP11.35□□□□□ -0.59
SMC1A-203ENST00000428014 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 DDX19BQ9UMR2 479 aa11.35□□□□□ -0.59
SMC1A-203ENST00000428014 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
SMC1A-203ENST00000428014 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 KLRK1P26718 216 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 ECE1P42892 770 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 GTF2IP78347 998 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 ATP8B2P98198 1209 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
SMC1A-203ENST00000428014 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
SMC1A-203ENST00000428014 WTIPA6NIX2 430 aaPredicted RBP11.33□□□□□ -0.6
SMC1A-203ENST00000428014 WNT10BO00744 389 aa11.33□□□□□ -0.6
SMC1A-203ENST00000428014 FKBP1CQ5VVH2 108 aa11.33□□□□□ -0.6
SMC1A-203ENST00000428014 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
SMC1A-203ENST00000428014 VPS37DQ86XT2 251 aa11.33□□□□□ -0.6
SMC1A-203ENST00000428014 APOBEC3FQ8IUX4 373 aaKnown RBP11.33□□□□□ -0.6
SMC1A-203ENST00000428014 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
SMC1A-203ENST00000428014 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
SMC1A-203ENST00000428014 HELBQ8NG08 1087 aaPredicted RBP11.33□□□□□ -0.6
SMC1A-203ENST00000428014 THSD7BQ9C0I4 1608 aa11.33□□□□□ -0.6
SMC1A-203ENST00000428014 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 MYO1BO43795 1136 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 MAP2K2P36507 400 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
SMC1A-203ENST00000428014 ATP2B3Q16720 1220 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 CST9Q5W186 159 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
SMC1A-203ENST00000428014 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
SMC1A-203ENST00000428014 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
SMC1A-203ENST00000428014 RLBP1P12271 317 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 AAMPQ13685 434 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 TNFAIP1Q13829 316 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 SCARF1Q14162 830 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 TBC1D10BQ4KMP7 808 aaPredicted RBP11.31□□□□□ -0.6
SMC1A-203ENST00000428014 MFSD14BQ5SR56 506 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
SMC1A-203ENST00000428014 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
SMC1A-203ENST00000428014 SNAP23O00161 211 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 EGFRP00533 1210 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 GYG1P46976 350 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 G3BP1Q13283 466 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMC1A-203ENST00000428014 DLGAP5Q15398 846 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 MAP3K11Q16584 847 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 KLHDC4Q8TBB5 520 aa11.3□□□□□ -0.6
SMC1A-203ENST00000428014 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms