RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
PHF1-204ENST00000427826 FAM84BQ96KN1 310 aaPredicted RBP18.98■□□□□ 0.63
PHF1-204ENST00000427826 AOC2O75106 756 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 DLGAP5Q15398 846 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 CAVIN4Q5BKX8 364 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 APOBEC3FQ8IUX4 373 aaKnown RBP18.97■□□□□ 0.63
PHF1-204ENST00000427826 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 MTMR14Q8NCE2 650 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 TDRD7Q8NHU6 1098 aaKnown RBP18.97■□□□□ 0.63
PHF1-204ENST00000427826 FAM205AQ6ZU69 1335 aa18.97■□□□□ 0.63
PHF1-204ENST00000427826 CA12O43570 354 aa18.96■□□□□ 0.63
PHF1-204ENST00000427826 GYG1P46976 350 aa18.96■□□□□ 0.63
PHF1-204ENST00000427826 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
PHF1-204ENST00000427826 ZBED3Q96IU2 234 aaPredicted RBP18.96■□□□□ 0.63
PHF1-204ENST00000427826 POLR2AP24928 1970 aaKnown RBP18.95■□□□□ 0.62
PHF1-204ENST00000427826 EYA2O00167 538 aa18.95■□□□□ 0.62
PHF1-204ENST00000427826 NF2P35240 595 aa18.95■□□□□ 0.62
PHF1-204ENST00000427826 ZNF157P51786 506 aaPredicted RBP18.95■□□□□ 0.62
PHF1-204ENST00000427826 FBXO33Q7Z6M2 555 aa18.95■□□□□ 0.62
PHF1-204ENST00000427826 VGLL2Q8N8G2 317 aa18.95■□□□□ 0.62
PHF1-204ENST00000427826 KLHDC4Q8TBB5 520 aa18.95■□□□□ 0.62
PHF1-204ENST00000427826 FBXO3Q9UK99 471 aa18.95■□□□□ 0.62
PHF1-204ENST00000427826 THSD7BQ9C0I4 1608 aa18.94■□□□□ 0.62
PHF1-204ENST00000427826 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
PHF1-204ENST00000427826 MYO1BO43795 1136 aa18.94■□□□□ 0.62
PHF1-204ENST00000427826 RFX5P48382 616 aaPredicted RBP18.94■□□□□ 0.62
PHF1-204ENST00000427826 LBX1P52954 281 aa18.94■□□□□ 0.62
PHF1-204ENST00000427826 PUM3Q15397 648 aaKnown RBP18.94■□□□□ 0.62
PHF1-204ENST00000427826 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
PHF1-204ENST00000427826 A0A1B0GUL6 1792 aa18.93■□□□□ 0.62
PHF1-204ENST00000427826 FRAT2O75474 233 aaPredicted RBP18.93■□□□□ 0.62
PHF1-204ENST00000427826 GNAI3P08754 354 aa18.93■□□□□ 0.62
PHF1-204ENST00000427826 IFIT1P09914 478 aaKnown RBP18.93■□□□□ 0.62
PHF1-204ENST00000427826 HSPA8P11142 646 aaKnown RBP18.93■□□□□ 0.62
PHF1-204ENST00000427826 PTPN12Q05209 780 aaKnown RBP18.93■□□□□ 0.62
PHF1-204ENST00000427826 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
PHF1-204ENST00000427826 MFSD14BQ5SR56 506 aa18.93■□□□□ 0.62
PHF1-204ENST00000427826 JAG2Q9Y219 1238 aa18.93■□□□□ 0.62
PHF1-204ENST00000427826 ZNF646O15015 1829 aaPredicted RBP18.93■□□□□ 0.62
PHF1-204ENST00000427826 TBC1D22AQ8WUA7 517 aa18.92■□□□□ 0.62
PHF1-204ENST00000427826 SCAF8Q9UPN6 1271 aaKnown RBP18.92■□□□□ 0.62
PHF1-204ENST00000427826 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
PHF1-204ENST00000427826 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 FAM155AB1AL88 458 aaPredicted RBP18.91■□□□□ 0.62
PHF1-204ENST00000427826 CIAO1O76071 339 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
PHF1-204ENST00000427826 ATF7IPQ6VMQ6 1270 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 REM2Q8IYK8 340 aaPredicted RBP18.91■□□□□ 0.62
PHF1-204ENST00000427826 LPIN2Q92539 896 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 PPP2R3BQ9Y5P8 575 aa18.91■□□□□ 0.62
PHF1-204ENST00000427826 SLC10A3P09131 477 aa18.9■□□□□ 0.62
PHF1-204ENST00000427826 SLC5A1P13866 664 aa18.9■□□□□ 0.62
PHF1-204ENST00000427826 FGFR2P21802 821 aa18.9■□□□□ 0.62
PHF1-204ENST00000427826 TTLL12Q14166 644 aaPredicted RBP18.9■□□□□ 0.62
PHF1-204ENST00000427826 PRAMEF18Q5VWM3 479 aa18.9■□□□□ 0.62
PHF1-204ENST00000427826 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
PHF1-204ENST00000427826 MEIS3Q99687 375 aa18.9■□□□□ 0.62
PHF1-204ENST00000427826 DEFB129Q9H1M3 183 aa18.9■□□□□ 0.62
PHF1-204ENST00000427826 TTF2Q9UNY4 1162 aaKnown RBP18.9■□□□□ 0.62
PHF1-204ENST00000427826 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
PHF1-204ENST00000427826 BCAR3O75815 825 aa18.89■□□□□ 0.61
PHF1-204ENST00000427826 IL15P40933 162 aaPredicted RBP18.89■□□□□ 0.61
PHF1-204ENST00000427826 BCAMP50895 628 aa18.89■□□□□ 0.61
PHF1-204ENST00000427826 ATG9AQ7Z3C6 839 aa18.89■□□□□ 0.61
PHF1-204ENST00000427826 ARMC9Q7Z3E5 817 aa18.89■□□□□ 0.61
PHF1-204ENST00000427826 PRMT6Q96LA8 375 aaPredicted RBP18.89■□□□□ 0.61
PHF1-204ENST00000427826 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.61
PHF1-204ENST00000427826 TRIM27P14373 513 aa18.88■□□□□ 0.61
PHF1-204ENST00000427826 KIF23Q02241 960 aaPredicted RBP18.88■□□□□ 0.61
PHF1-204ENST00000427826 CHAF1AQ13111 956 aaPredicted RBP18.88■□□□□ 0.61
PHF1-204ENST00000427826 SIL1Q9H173 461 aa18.88■□□□□ 0.61
PHF1-204ENST00000427826 COPRSQ9NQ92 184 aa18.88■□□□□ 0.61
PHF1-204ENST00000427826 IQSEC3Q9UPP2 1182 aaPredicted RBP18.88■□□□□ 0.61
PHF1-204ENST00000427826 PAPPA2Q9BXP8 1791 aa18.88■□□□□ 0.61
PHF1-204ENST00000427826 UBE2Q2LH0YL09 131 aa18.87■□□□□ 0.61
PHF1-204ENST00000427826 HDLBPQ00341 1268 aaKnown RBP18.87■□□□□ 0.61
PHF1-204ENST00000427826 SUPT20HL1Q3ZLR7 823 aa18.87■□□□□ 0.61
PHF1-204ENST00000427826 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
PHF1-204ENST00000427826 ZIC5Q96T25 663 aa18.87■□□□□ 0.61
PHF1-204ENST00000427826 SUGT1Q9Y2Z0 365 aa18.87■□□□□ 0.61
PHF1-204ENST00000427826 CLRN2A0PK11 232 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 TNFAIP1Q13829 316 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 RASAL3Q86YV0 1011 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 MRIQ9BWK5 157 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 VEZTQ9HBM0 779 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 SAGE1Q9NXZ1 904 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 PCDHAC2Q9Y5I4 1007 aa18.86■□□□□ 0.61
PHF1-204ENST00000427826 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
PHF1-204ENST00000427826 SRGAP3O43295 1099 aa18.85■□□□□ 0.61
PHF1-204ENST00000427826 GNAI2P04899 355 aa18.85■□□□□ 0.61
PHF1-204ENST00000427826 MTX1Q13505 466 aa18.85■□□□□ 0.61
PHF1-204ENST00000427826 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
PHF1-204ENST00000427826 MOB2Q70IA6 237 aa18.85■□□□□ 0.61
PHF1-204ENST00000427826 DZIP1LQ8IYY4 767 aaKnown RBP18.85■□□□□ 0.61
PHF1-204ENST00000427826 GNL3LQ9NVN8 582 aaKnown RBP18.85■□□□□ 0.61
PHF1-204ENST00000427826 MAST3O60307 1309 aa18.84■□□□□ 0.61
PHF1-204ENST00000427826 PPP1R12BO60237 982 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms