RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 URI1O94763 535 aaPredicted RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 GSPT1P15170 499 aaKnown RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 SDSP20132 328 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 GYS2P54840 703 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 ST5P78524 1137 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 OS9Q13438 667 aaPredicted RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 SART3Q15020 963 aaKnown RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 NEUROD2Q15784 382 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 LONRF2Q1L5Z9 754 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 IQCEQ6IPM2 695 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCDC73Q6ZRK6 1079 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 NUDT18Q6ZVK8 323 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 SAMD7Q7Z3H4 446 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 PRPF38AQ8NAV1 312 aaKnown RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 MIPOL1Q8TD10 442 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 RUFY2Q8WXA3 655 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 P3H4Q92791 437 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 ACTR5Q9H9F9 607 aaPredicted RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 GGA2Q9UJY4 613 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 CNPY2Q9Y2B0 182 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 NUP153P49790 1475 aaKnown RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 RPGRIP1LQ68CZ1 1315 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 TRPM2O94759 1503 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 YTHDC2Q9H6S0 1430 aaKnown RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ANKRD33BA6NCL7 494 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 SRRM3A6NNA2 597 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 NBPF26B4DH59 902 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 LUC7L3O95232 432 aaKnown RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 U2AF1L5P0DN76 240 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 SYT1P21579 422 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 GPTP24298 496 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ARID4AP29374 1257 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 GNAI1P63096 354 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCZ1BP86790 482 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCZ1P86791 482 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 U2AF1Q01081 240 aaKnown RBP eCLIP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 PPP2R3AQ06190 1150 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 LRMPQ12912 555 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 PREPLQ4J6C6 727 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 PADI6Q6TGC4 694 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 REXO1L1PQ8IX06 675 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ANKRD44Q8N8A2 993 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 N4BP2L2Q92802 583 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCDC102AQ96A19 550 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 DTNBP1Q96EV8 351 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 SGSM3Q96HU1 749 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 RPGRIP1Q96KN7 1286 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 SPATA32Q96LK8 384 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ESYT1Q9BSJ8 1104 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 FUT8Q9BYC5 575 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 LCMT1Q9UIC8 334 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ANAPC4Q9UJX5 808 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ODF2LQ9ULJ1 636 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 SH3BP1Q9Y3L3 701 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 RAD54L2Q9Y4B4 1467 aa6.44□□□□□ -1.38
VTI1BP4-201ENST00000427516 ZFYVE9O95405 1425 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 NRXN1Q9ULB1 1477 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 GOLGA6L10A0A0M3HER8 536 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 MAFGO15525 162 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ZEB2O60315 1214 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 KINO60870 393 aaKnown RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 RGS20O76081 388 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 FSBPO95073 299 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 HNRNPH1P31943 449 aaKnown RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 AARSP49588 968 aaKnown RBP eCLIP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 FOXD4L5Q5VV16 416 aaPredicted RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ARMC9Q7Z3E5 817 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 SDCCAG8Q86SQ7 713 aaPredicted RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 IQCA1Q86XH1 822 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCAR1Q8IX12 1150 aaKnown RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCDC170Q8IYT3 715 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 MPNDQ8N594 471 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 C3orf20Q8ND61 904 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 FOXD4L4Q8WXT5 416 aaPredicted RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ZBTB9Q96C00 473 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ANKRD27Q96NW4 1050 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 MOV10L1Q9BXT6 1211 aaKnown RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 UPF3BQ9BZI7 483 aaKnown RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 TM6SF1Q9BZW5 370 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ANO2Q9NQ90 1003 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ST7Q9NRC1 585 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 MYO1AQ9UBC5 1043 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 MCM8Q9UJA3 840 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 RAB21Q9UL25 225 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 ZNF644Q9H582 1327 aaPredicted RBP6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 FRMPD1Q5SYB0 1578 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 SETBP1Q9Y6X0 1596 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 KDRP35968 1356 aa6.43□□□□□ -1.38
VTI1BP4-201ENST00000427516 NSD3Q9BZ95 1437 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 DISP1Q96F81 1524 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 GOLGA8KD6RF30 607 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 LIN7AO14910 233 aaPredicted RBP6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 OPA1O60313 960 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 SHOX2O60902 331 aaPredicted RBP6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 SASH1O94885 1247 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 PSMA5P28066 241 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 GCKP35557 465 aa6.42□□□□□ -1.38
VTI1BP4-201ENST00000427516 CHMP4BP1P59074 171 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms