RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 PTPN22Q9Y2R2 807 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 LAMB1P07942 1786 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 COL1A1P02452 1464 aaPredicted RBP11.13□□□□□ -0.63
VNN3-208ENST00000427187 H7C1W4 665 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 CHRNDQ07001 517 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 NBPF12Q5TAG4 269 aaPredicted RBP11.13□□□□□ -0.63
VNN3-208ENST00000427187 MPHOSPH8Q99549 860 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 ANKRD2Q9GZV1 360 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 CD209Q9NNX6 404 aa11.13□□□□□ -0.63
VNN3-208ENST00000427187 RBBP6Q7Z6E9 1792 aaKnown RBP11.13□□□□□ -0.63
VNN3-208ENST00000427187 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
VNN3-208ENST00000427187 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
VNN3-208ENST00000427187 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
VNN3-208ENST00000427187 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
VNN3-208ENST00000427187 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
VNN3-208ENST00000427187 CFAP100Q494V2 611 aa11.12□□□□□ -0.63
VNN3-208ENST00000427187 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
VNN3-208ENST00000427187 PRMT6Q96LA8 375 aaPredicted RBP11.12□□□□□ -0.63
VNN3-208ENST00000427187 PTPN18Q99952 460 aa11.12□□□□□ -0.63
VNN3-208ENST00000427187 IRS2Q9Y4H2 1338 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 USP2O75604 605 aaPredicted RBP11.11□□□□□ -0.63
VNN3-208ENST00000427187 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
VNN3-208ENST00000427187 INHBEP58166 350 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 CALD1Q05682 793 aaKnown RBP11.11□□□□□ -0.63
VNN3-208ENST00000427187 GCKRQ14397 625 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
VNN3-208ENST00000427187 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 ZSWIM8A7E2V4 1837 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
VNN3-208ENST00000427187 SLC4A2P04920 1241 aa11.1□□□□□ -0.63
VNN3-208ENST00000427187 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
VNN3-208ENST00000427187 CASP7P55210 303 aa11.1□□□□□ -0.63
VNN3-208ENST00000427187 RASA3Q14644 834 aa11.1□□□□□ -0.63
VNN3-208ENST00000427187 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
VNN3-208ENST00000427187 PPP2R3BQ9Y5P8 575 aa11.1□□□□□ -0.63
VNN3-208ENST00000427187 ANKRD18BA2A2Z9 1011 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 MYO1BO43795 1136 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 PLIN1O60240 522 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
VNN3-208ENST00000427187 CSF1RP07333 972 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 IREB2P48200 963 aaKnown RBP11.09□□□□□ -0.63
VNN3-208ENST00000427187 MMP14P50281 582 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 SP3Q02447 781 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 SUPT20HL1Q3ZLR7 823 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 MTMR14Q8NCE2 650 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 OPTNQ96CV9 577 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 PLA2G12BQ9BX93 195 aa11.09□□□□□ -0.63
VNN3-208ENST00000427187 IL1R1P14778 569 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 FLIIQ13045 1269 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 TWISTNBQ3B726 338 aaPredicted RBP11.08□□□□□ -0.64
VNN3-208ENST00000427187 OTUD7BQ6GQQ9 843 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 ZNF804AQ7Z570 1209 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 ANKRD13AQ8IZ07 590 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 ZNF594Q96JF6 807 aaPredicted RBP11.08□□□□□ -0.64
VNN3-208ENST00000427187 ZNF333Q96JL9 665 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
VNN3-208ENST00000427187 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
VNN3-208ENST00000427187 FKBP5Q13451 457 aaPredicted RBP11.07□□□□□ -0.64
VNN3-208ENST00000427187 TAF1CQ15572 869 aaPredicted RBP11.07□□□□□ -0.64
VNN3-208ENST00000427187 DNAAF4Q8WXU2 420 aa11.07□□□□□ -0.64
VNN3-208ENST00000427187 BRI3BPQ8WY22 251 aa11.07□□□□□ -0.64
VNN3-208ENST00000427187 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
VNN3-208ENST00000427187 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
VNN3-208ENST00000427187 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
VNN3-208ENST00000427187 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
VNN3-208ENST00000427187 ZNF70Q9UC06 446 aaPredicted RBP11.07□□□□□ -0.64
VNN3-208ENST00000427187 CCL15-CCL14A0A0B4J2E2 113 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
VNN3-208ENST00000427187 TCP10L2B9ZVM9 353 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 FOXO4P98177 505 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
VNN3-208ENST00000427187 VGLL4Q14135 290 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 CCL15Q16663 113 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 SLC4A8Q2Y0W8 1093 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 EPHA10Q5JZY3 1008 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.06□□□□□ -0.64
VNN3-208ENST00000427187 C15orf52Q6ZUT6 534 aaKnown RBP11.06□□□□□ -0.64
VNN3-208ENST00000427187 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 SH3TC2Q8TF17 1288 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 ARHGAP39Q9C0H5 1083 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 TMEM39BQ9GZU3 492 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
VNN3-208ENST00000427187 RANBP2P49792 3224 aaKnown RBP11.05□□□□□ -0.64
VNN3-208ENST00000427187 F6X3S4 739 aa11.05□□□□□ -0.64
VNN3-208ENST00000427187 MFSD14BQ5SR56 506 aa11.05□□□□□ -0.64
VNN3-208ENST00000427187 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms