RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 GRM8O00222 908 aa12.77□□□□□ -0.37
GACAT3-201ENST00000426539 TRPA1O75762 1119 aa12.77□□□□□ -0.37
GACAT3-201ENST00000426539 KCNJ4P48050 445 aa12.77□□□□□ -0.37
GACAT3-201ENST00000426539 DGKZQ13574 1117 aa12.77□□□□□ -0.37
GACAT3-201ENST00000426539 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.37
GACAT3-201ENST00000426539 PCDHAC2Q9Y5I4 1007 aa12.77□□□□□ -0.37
GACAT3-201ENST00000426539 CASP8AP2Q9UKL3 1982 aa12.76□□□□□ -0.37
GACAT3-201ENST00000426539 KAZALD1Q96I82 304 aa12.76□□□□□ -0.37
GACAT3-201ENST00000426539 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
GACAT3-201ENST00000426539 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
GACAT3-201ENST00000426539 IL1R1P14778 569 aa12.75□□□□□ -0.37
GACAT3-201ENST00000426539 RGS19P49795 217 aa12.75□□□□□ -0.37
GACAT3-201ENST00000426539 MMP14P50281 582 aa12.75□□□□□ -0.37
GACAT3-201ENST00000426539 AOX1Q06278 1338 aa12.75□□□□□ -0.37
GACAT3-201ENST00000426539 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
GACAT3-201ENST00000426539 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
GACAT3-201ENST00000426539 SLC4A10Q6U841 1118 aa12.74□□□□□ -0.37
GACAT3-201ENST00000426539 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
GACAT3-201ENST00000426539 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
GACAT3-201ENST00000426539 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
GACAT3-201ENST00000426539 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
GACAT3-201ENST00000426539 PLIN1O60240 522 aa12.73□□□□□ -0.37
GACAT3-201ENST00000426539 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 TTLL12Q14166 644 aaPredicted RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 APOBEC3FQ8IUX4 373 aaKnown RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
GACAT3-201ENST00000426539 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 SRCIN1Q9C0H9 1055 aa12.73□□□□□ -0.37
GACAT3-201ENST00000426539 C9orf78Q9NZ63 289 aaPredicted RBP12.73□□□□□ -0.37
GACAT3-201ENST00000426539 FZD1Q9UP38 647 aa12.73□□□□□ -0.37
GACAT3-201ENST00000426539 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
GACAT3-201ENST00000426539 UTYO14607 1347 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
GACAT3-201ENST00000426539 FKBP1AP62942 108 aaKnown RBP12.72□□□□□ -0.37
GACAT3-201ENST00000426539 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
GACAT3-201ENST00000426539 PRKG1Q13976 671 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 DLGAP5Q15398 846 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 LDLRAD1Q5T700 205 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 ZNF804AQ7Z570 1209 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
GACAT3-201ENST00000426539 DEFB129Q9H1M3 183 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 SSC5DA1L4H1 1573 aa12.72□□□□□ -0.37
GACAT3-201ENST00000426539 TBC1D8O95759 1140 aa12.71□□□□□ -0.37
GACAT3-201ENST00000426539 NF2P35240 595 aa12.71□□□□□ -0.37
GACAT3-201ENST00000426539 TM4SF4P48230 202 aa12.71□□□□□ -0.37
GACAT3-201ENST00000426539 CFAP100Q494V2 611 aa12.71□□□□□ -0.37
GACAT3-201ENST00000426539 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
GACAT3-201ENST00000426539 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
GACAT3-201ENST00000426539 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
GACAT3-201ENST00000426539 RIPOR2Q9Y4F9 1068 aa12.71□□□□□ -0.37
GACAT3-201ENST00000426539 FAM205AQ6ZU69 1335 aa12.7□□□□□ -0.38
GACAT3-201ENST00000426539 CLRN2A0PK11 232 aa12.7□□□□□ -0.38
GACAT3-201ENST00000426539 GYG1P46976 350 aa12.7□□□□□ -0.38
GACAT3-201ENST00000426539 MLLT1Q03111 559 aaPredicted RBP12.7□□□□□ -0.38
GACAT3-201ENST00000426539 UBE4AQ14139 1066 aa12.7□□□□□ -0.38
GACAT3-201ENST00000426539 RABL6Q3YEC7 729 aaPredicted RBP12.7□□□□□ -0.38
GACAT3-201ENST00000426539 ARMC9Q7Z3E5 817 aa12.7□□□□□ -0.38
GACAT3-201ENST00000426539 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
GACAT3-201ENST00000426539 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
GACAT3-201ENST00000426539 BICC1Q9H694 974 aaKnown RBP12.7□□□□□ -0.38
GACAT3-201ENST00000426539 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
GACAT3-201ENST00000426539 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
GACAT3-201ENST00000426539 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
GACAT3-201ENST00000426539 SPRYD7Q5W111 196 aa12.69□□□□□ -0.38
GACAT3-201ENST00000426539 CTU1Q7Z7A3 348 aaKnown RBP12.69□□□□□ -0.38
GACAT3-201ENST00000426539 R3HDMLQ9H3Y0 253 aa12.69□□□□□ -0.38
GACAT3-201ENST00000426539 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
GACAT3-201ENST00000426539 GRIK5Q16478 980 aa12.68□□□□□ -0.38
GACAT3-201ENST00000426539 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
GACAT3-201ENST00000426539 NBPF12Q5TAG4 269 aaPredicted RBP12.68□□□□□ -0.38
GACAT3-201ENST00000426539 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
GACAT3-201ENST00000426539 SSH1Q8WYL5 1049 aa12.68□□□□□ -0.38
GACAT3-201ENST00000426539 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
GACAT3-201ENST00000426539 PPP2R3BQ9Y5P8 575 aa12.68□□□□□ -0.38
GACAT3-201ENST00000426539 MROH5Q6ZUA9 1318 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 AKAP11Q9UKA4 1901 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
GACAT3-201ENST00000426539 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
GACAT3-201ENST00000426539 PTPRCP08575 1304 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 E9PSI1 815 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 GPR25O00155 361 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 MYO1BO43795 1136 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 USP2O75604 605 aaPredicted RBP12.66□□□□□ -0.38
GACAT3-201ENST00000426539 RBM5P52756 815 aaKnown RBP eCLIP12.66□□□□□ -0.38
GACAT3-201ENST00000426539 SREBF2Q12772 1141 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 RASA3Q14644 834 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
GACAT3-201ENST00000426539 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 CFHR5Q9BXR6 569 aa12.66□□□□□ -0.38
GACAT3-201ENST00000426539 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms