RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 PCDHAC2Q9Y5I4 1007 aa31.42■■■□□ 2.62
PTPMT1-203ENST00000426530 GYG1P46976 350 aa31.41■■■□□ 2.62
PTPMT1-203ENST00000426530 RIPOR2Q9Y4F9 1068 aa31.41■■■□□ 2.62
PTPMT1-203ENST00000426530 ECM29Q5VYK3 1845 aa31.4■■■□□ 2.62
PTPMT1-203ENST00000426530 UBE4AQ14139 1066 aa31.39■■■□□ 2.62
PTPMT1-203ENST00000426530 ZBED3Q96IU2 234 aaPredicted RBP31.39■■■□□ 2.62
PTPMT1-203ENST00000426530 SLC10A3P09131 477 aa31.38■■■□□ 2.61
PTPMT1-203ENST00000426530 KIF23Q02241 960 aaPredicted RBP31.38■■■□□ 2.61
PTPMT1-203ENST00000426530 CCDC102AQ96A19 550 aa31.38■■■□□ 2.61
PTPMT1-203ENST00000426530 NOB1Q9ULX3 412 aaKnown RBP31.38■■■□□ 2.61
PTPMT1-203ENST00000426530 DLGAP5Q15398 846 aa31.37■■■□□ 2.61
PTPMT1-203ENST00000426530 METTL24Q5JXM2 366 aa31.37■■■□□ 2.61
PTPMT1-203ENST00000426530 MROH5Q6ZUA9 1318 aa31.37■■■□□ 2.61
PTPMT1-203ENST00000426530 ARAP2Q8WZ64 1704 aa31.37■■■□□ 2.61
PTPMT1-203ENST00000426530 CASP8AP2Q9UKL3 1982 aa31.36■■■□□ 2.61
PTPMT1-203ENST00000426530 MMP14P50281 582 aa31.36■■■□□ 2.61
PTPMT1-203ENST00000426530 RASAL3Q86YV0 1011 aa31.36■■■□□ 2.61
PTPMT1-203ENST00000426530 FAM84BQ96KN1 310 aaPredicted RBP31.36■■■□□ 2.61
PTPMT1-203ENST00000426530 UBE2Q2LH0YL09 131 aa31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 CA12O43570 354 aa31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 HIBADHP31937 336 aaKnown RBP31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 FKBP1BP68106 108 aa31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 TTLL12Q14166 644 aaPredicted RBP31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 APOBEC3FQ8IUX4 373 aaKnown RBP31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 TDRD7Q8NHU6 1098 aaKnown RBP31.35■■■□□ 2.61
PTPMT1-203ENST00000426530 AOX1Q06278 1338 aa31.34■■■□□ 2.61
PTPMT1-203ENST00000426530 CFAP100Q494V2 611 aa31.34■■■□□ 2.61
PTPMT1-203ENST00000426530 IQSEC3Q9UPP2 1182 aaPredicted RBP31.34■■■□□ 2.61
PTPMT1-203ENST00000426530 FAM205AQ6ZU69 1335 aa31.33■■■□□ 2.61
PTPMT1-203ENST00000426530 CT47B1P0C2W7 299 aaPredicted RBP31.33■■■□□ 2.61
PTPMT1-203ENST00000426530 FKBP1AP62942 108 aaKnown RBP31.33■■■□□ 2.61
PTPMT1-203ENST00000426530 PRKG1Q13976 671 aa31.33■■■□□ 2.61
PTPMT1-203ENST00000426530 AKAP11Q9UKA4 1901 aa31.32■■■□□ 2.6
PTPMT1-203ENST00000426530 CLRN2A0PK11 232 aa31.32■■■□□ 2.6
PTPMT1-203ENST00000426530 MFSD14BQ5SR56 506 aa31.32■■■□□ 2.6
PTPMT1-203ENST00000426530 VGLL2Q8N8G2 317 aa31.32■■■□□ 2.6
PTPMT1-203ENST00000426530 NF2P35240 595 aa31.31■■■□□ 2.6
PTPMT1-203ENST00000426530 MTMR14Q8NCE2 650 aa31.31■■■□□ 2.6
PTPMT1-203ENST00000426530 SPDYE2BA6NHP3 402 aa31.3■■■□□ 2.6
PTPMT1-203ENST00000426530 SPDYE6P0CI01 402 aa31.3■■■□□ 2.6
PTPMT1-203ENST00000426530 RFX5P48382 616 aaPredicted RBP31.3■■■□□ 2.6
PTPMT1-203ENST00000426530 RBM5P52756 815 aaKnown RBP eCLIP31.3■■■□□ 2.6
PTPMT1-203ENST00000426530 PRMT6Q96LA8 375 aaPredicted RBP31.3■■■□□ 2.6
PTPMT1-203ENST00000426530 FZD1Q9UP38 647 aa31.3■■■□□ 2.6
PTPMT1-203ENST00000426530 PDE8BO95263 885 aa31.29■■■□□ 2.6
PTPMT1-203ENST00000426530 RARSP54136 660 aaKnown RBP31.29■■■□□ 2.6
PTPMT1-203ENST00000426530 UBTFL1P0CB47 393 aaPredicted RBP31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 CHAF1AQ13111 956 aaPredicted RBP31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 VPS37DQ86XT2 251 aa31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 CSRNP1Q96S65 589 aa31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 API5Q9BZZ5 524 aaKnown RBP31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 DEFB129Q9H1M3 183 aa31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 VEZTQ9HBM0 779 aa31.28■■■□□ 2.6
PTPMT1-203ENST00000426530 COL1A1P02452 1464 aaPredicted RBP31.27■■■□□ 2.6
PTPMT1-203ENST00000426530 GRIK5Q16478 980 aa31.27■■■□□ 2.6
PTPMT1-203ENST00000426530 FBXO33Q7Z6M2 555 aa31.27■■■□□ 2.6
PTPMT1-203ENST00000426530 TTF2Q9UNY4 1162 aaKnown RBP31.27■■■□□ 2.6
PTPMT1-203ENST00000426530 SSC5DA1L4H1 1573 aa31.26■■■□□ 2.6
PTPMT1-203ENST00000426530 ABHD8Q96I13 439 aa31.26■■■□□ 2.59
PTPMT1-203ENST00000426530 RNF186Q9NXI6 227 aa31.26■■■□□ 2.59
PTPMT1-203ENST00000426530 MYO1BO43795 1136 aa31.25■■■□□ 2.59
PTPMT1-203ENST00000426530 TRPA1O75762 1119 aa31.25■■■□□ 2.59
PTPMT1-203ENST00000426530 BCAMP50895 628 aa31.25■■■□□ 2.59
PTPMT1-203ENST00000426530 PTPN12Q05209 780 aaKnown RBP31.25■■■□□ 2.59
PTPMT1-203ENST00000426530 EYA2O00167 538 aa31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 MKRN3Q13064 507 aaKnown RBP31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 CAVIN4Q5BKX8 364 aa31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 MIER1Q8N108 512 aa31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 SIL1Q9H173 461 aa31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 ANGEL1Q9UNK9 670 aaKnown RBP31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 LRRFIP2Q9Y608 721 aaKnown RBP31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 MYH13Q9UKX3 1938 aa31.24■■■□□ 2.59
PTPMT1-203ENST00000426530 FRAT2O75474 233 aaPredicted RBP31.23■■■□□ 2.59
PTPMT1-203ENST00000426530 PUM3Q15397 648 aaKnown RBP31.23■■■□□ 2.59
PTPMT1-203ENST00000426530 MEIS3Q99687 375 aa31.23■■■□□ 2.59
PTPMT1-203ENST00000426530 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.23■■■□□ 2.59
PTPMT1-203ENST00000426530 FGFR2P21802 821 aa31.22■■■□□ 2.59
PTPMT1-203ENST00000426530 ATG9AQ7Z3C6 839 aa31.22■■■□□ 2.59
PTPMT1-203ENST00000426530 ARMC9Q7Z3E5 817 aa31.22■■■□□ 2.59
PTPMT1-203ENST00000426530 SAGE1Q9NXZ1 904 aa31.22■■■□□ 2.59
PTPMT1-203ENST00000426530 KIF16BQ96L93 1317 aa31.22■■■□□ 2.59
PTPMT1-203ENST00000426530 IFIT1P09914 478 aaKnown RBP31.2■■■□□ 2.59
PTPMT1-203ENST00000426530 TDRD3Q9H7E2 651 aaKnown RBP31.2■■■□□ 2.59
PTPMT1-203ENST00000426530 SERPINA10Q9UK55 444 aa31.2■■■□□ 2.59
PTPMT1-203ENST00000426530 TNNQ9UQP3 1299 aa31.2■■■□□ 2.59
PTPMT1-203ENST00000426530 CRKP46108 304 aa31.19■■■□□ 2.58
PTPMT1-203ENST00000426530 PPP2R3BQ9Y5P8 575 aa31.19■■■□□ 2.58
PTPMT1-203ENST00000426530 RASA3Q14644 834 aa31.18■■■□□ 2.58
PTPMT1-203ENST00000426530 NBPF12Q5TAG4 269 aaPredicted RBP31.18■■■□□ 2.58
PTPMT1-203ENST00000426530 ZNF70Q9UC06 446 aaPredicted RBP31.18■■■□□ 2.58
PTPMT1-203ENST00000426530 PA2G4Q9UQ80 394 aaKnown RBP31.18■■■□□ 2.58
PTPMT1-203ENST00000426530 SLC5A1P13866 664 aa31.17■■■□□ 2.58
PTPMT1-203ENST00000426530 SPDYE2Q495Y8 402 aa31.17■■■□□ 2.58
PTPMT1-203ENST00000426530 LDLRAD1Q5T700 205 aa31.17■■■□□ 2.58
PTPMT1-203ENST00000426530 DZIP1LQ8IYY4 767 aaKnown RBP31.17■■■□□ 2.58
PTPMT1-203ENST00000426530 BCAR3O75815 825 aa31.16■■■□□ 2.58
PTPMT1-203ENST00000426530 DIEXFQ68CQ4 756 aaKnown RBP31.16■■■□□ 2.58
PTPMT1-203ENST00000426530 MCOLN1Q9GZU1 580 aa31.16■■■□□ 2.58
PTPMT1-203ENST00000426530 DGKZQ13574 1117 aa31.15■■■□□ 2.58
PTPMT1-203ENST00000426530 TBC1D22AQ8WUA7 517 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms