RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 MEIS3Q99687 375 aa27.58■■■□□ 2.01
SEMA3F-205ENST00000426511 IPO8O15397 1037 aaKnown RBP27.57■■■□□ 2
SEMA3F-205ENST00000426511 IFFO2Q5TF58 517 aa27.57■■■□□ 2
SEMA3F-205ENST00000426511 PRAMEF18Q5VWM3 479 aa27.57■■■□□ 2
SEMA3F-205ENST00000426511 ARHGAP45Q92619 1136 aa27.57■■■□□ 2
SEMA3F-205ENST00000426511 HHIPL1Q96JK4 782 aa27.57■■■□□ 2
SEMA3F-205ENST00000426511 SIL1Q9H173 461 aa27.57■■■□□ 2
SEMA3F-205ENST00000426511 IQSEC3Q9UPP2 1182 aaPredicted RBP27.57■■■□□ 2
SEMA3F-205ENST00000426511 FRAT2O75474 233 aaPredicted RBP27.56■■■□□ 2
SEMA3F-205ENST00000426511 PDE8BO95263 885 aa27.56■■■□□ 2
SEMA3F-205ENST00000426511 MMP14P50281 582 aa27.56■■■□□ 2
SEMA3F-205ENST00000426511 DLGAP5Q15398 846 aa27.56■■■□□ 2
SEMA3F-205ENST00000426511 BEGAINQ9BUH8 593 aa27.56■■■□□ 2
SEMA3F-205ENST00000426511 HDAC5Q9UQL6 1122 aa27.56■■■□□ 2
SEMA3F-205ENST00000426511 RFX5P48382 616 aaPredicted RBP27.55■■■□□ 2
SEMA3F-205ENST00000426511 CTCFP49711 727 aaPredicted RBP27.55■■■□□ 2
SEMA3F-205ENST00000426511 CAVIN4Q5BKX8 364 aa27.55■■■□□ 2
SEMA3F-205ENST00000426511 TDRD7Q8NHU6 1098 aaKnown RBP27.55■■■□□ 2
SEMA3F-205ENST00000426511 CLUAP1Q96AJ1 413 aa27.55■■■□□ 2
SEMA3F-205ENST00000426511 TNNQ9UQP3 1299 aa27.55■■■□□ 2
SEMA3F-205ENST00000426511 EYA2O00167 538 aa27.54■■■□□ 2
SEMA3F-205ENST00000426511 TRIM27P14373 513 aa27.54■■■□□ 2
SEMA3F-205ENST00000426511 RBM5P52756 815 aaKnown RBP eCLIP27.54■■■□□ 2
SEMA3F-205ENST00000426511 PTPN12Q05209 780 aaKnown RBP27.54■■■□□ 2
SEMA3F-205ENST00000426511 CHAF1AQ13111 956 aaPredicted RBP27.54■■■□□ 2
SEMA3F-205ENST00000426511 VGLL2Q8N8G2 317 aa27.54■■■□□ 2
SEMA3F-205ENST00000426511 THSD7BQ9C0I4 1608 aa27.53■■■□□ 2
SEMA3F-205ENST00000426511 MAP2K2P36507 400 aa27.53■■■□□ 2
SEMA3F-205ENST00000426511 MFSD14BQ5SR56 506 aa27.53■■■□□ 2
SEMA3F-205ENST00000426511 INTS3Q68E01 1043 aaKnown RBP27.53■■■□□ 2
SEMA3F-205ENST00000426511 RGMBQ6NW40 437 aa27.53■■■□□ 2
SEMA3F-205ENST00000426511 TNS4Q8IZW8 715 aa27.53■■■□□ 2
SEMA3F-205ENST00000426511 PCDHAC2Q9Y5I4 1007 aa27.53■■■□□ 2
SEMA3F-205ENST00000426511 FAM205AQ6ZU69 1335 aa27.52■■■□□ 2
SEMA3F-205ENST00000426511 IFIT1P09914 478 aaKnown RBP27.52■■■□□ 2
SEMA3F-205ENST00000426511 ZNF157P51786 506 aaPredicted RBP27.52■■■□□ 2
SEMA3F-205ENST00000426511 FKBP1AP62942 108 aaKnown RBP27.52■■■□□ 2
SEMA3F-205ENST00000426511 TTLL12Q14166 644 aaPredicted RBP27.52■■■□□ 2
SEMA3F-205ENST00000426511 PUM3Q15397 648 aaKnown RBP27.52■■■□□ 2
SEMA3F-205ENST00000426511 CFAP100Q494V2 611 aa27.52■■■□□ 2
SEMA3F-205ENST00000426511 ATF7IPQ6VMQ6 1270 aa27.52■■■□□ 2
SEMA3F-205ENST00000426511 LBX1P52954 281 aa27.51■■□□□ 1.99
SEMA3F-205ENST00000426511 FBXO33Q7Z6M2 555 aa27.51■■□□□ 1.99
SEMA3F-205ENST00000426511 APOBEC3FQ8IUX4 373 aaKnown RBP27.51■■□□□ 1.99
SEMA3F-205ENST00000426511 GNAI3P08754 354 aa27.5■■□□□ 1.99
SEMA3F-205ENST00000426511 BCAMP50895 628 aa27.5■■□□□ 1.99
SEMA3F-205ENST00000426511 ZBED3Q96IU2 234 aaPredicted RBP27.5■■□□□ 1.99
SEMA3F-205ENST00000426511 PA2G4Q9UQ80 394 aaKnown RBP27.5■■□□□ 1.99
SEMA3F-205ENST00000426511 CLRN2A0PK11 232 aa27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 MYO1BO43795 1136 aa27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 SLC5A1P13866 664 aa27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 NF2P35240 595 aa27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 NOGQ13253 232 aa27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 MOB2Q70IA6 237 aa27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 TTF2Q9UNY4 1162 aaKnown RBP27.49■■□□□ 1.99
SEMA3F-205ENST00000426511 ZKSCAN2Q63HK3 967 aa27.48■■□□□ 1.99
SEMA3F-205ENST00000426511 ATG9AQ7Z3C6 839 aa27.48■■□□□ 1.99
SEMA3F-205ENST00000426511 ZIC5Q96T25 663 aa27.48■■□□□ 1.99
SEMA3F-205ENST00000426511 VEZTQ9HBM0 779 aa27.48■■□□□ 1.99
SEMA3F-205ENST00000426511 TSKSQ9UJT2 592 aa27.48■■□□□ 1.99
SEMA3F-205ENST00000426511 ZBED9Q6R2W3 1325 aa27.47■■□□□ 1.99
SEMA3F-205ENST00000426511 HSPA8P11142 646 aaKnown RBP27.47■■□□□ 1.99
SEMA3F-205ENST00000426511 PRKG1Q13976 671 aa27.47■■□□□ 1.99
SEMA3F-205ENST00000426511 CCDC102AQ96A19 550 aa27.47■■□□□ 1.99
SEMA3F-205ENST00000426511 CEP126Q9P2H0 1117 aa27.47■■□□□ 1.99
SEMA3F-205ENST00000426511 PAPPA2Q9BXP8 1791 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 SPDYE2BA6NHP3 402 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 SPDYE6P0CI01 402 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 FGFR2P21802 821 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 FKBP1BP68106 108 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 MTMR14Q8NCE2 650 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 LPIN2Q92539 896 aa27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 PRMT6Q96LA8 375 aaPredicted RBP27.46■■□□□ 1.99
SEMA3F-205ENST00000426511 UBE2Q2LH0YL09 131 aa27.45■■□□□ 1.98
SEMA3F-205ENST00000426511 SRGAP3O43295 1099 aa27.45■■□□□ 1.98
SEMA3F-205ENST00000426511 CIAO1O76071 339 aa27.45■■□□□ 1.98
SEMA3F-205ENST00000426511 PRDM10Q9NQV6 1147 aa27.45■■□□□ 1.98
SEMA3F-205ENST00000426511 FAM155AB1AL88 458 aaPredicted RBP27.44■■□□□ 1.98
SEMA3F-205ENST00000426511 ATP2B3Q16720 1220 aa27.44■■□□□ 1.98
SEMA3F-205ENST00000426511 TMEM57Q8N5G2 664 aa27.44■■□□□ 1.98
SEMA3F-205ENST00000426511 DEFB129Q9H1M3 183 aa27.44■■□□□ 1.98
SEMA3F-205ENST00000426511 FBXO3Q9UK99 471 aa27.44■■□□□ 1.98
SEMA3F-205ENST00000426511 AOX1Q06278 1338 aa27.43■■□□□ 1.98
SEMA3F-205ENST00000426511 IL15P40933 162 aaPredicted RBP27.43■■□□□ 1.98
SEMA3F-205ENST00000426511 GRIK5Q16478 980 aa27.43■■□□□ 1.98
SEMA3F-205ENST00000426511 TBC1D22AQ8WUA7 517 aa27.43■■□□□ 1.98
SEMA3F-205ENST00000426511 ARAP2Q8WZ64 1704 aa27.43■■□□□ 1.98
SEMA3F-205ENST00000426511 CAPN15O75808 1086 aa27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 GNAI2P04899 355 aa27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 SLC10A3P09131 477 aa27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 KIF23Q02241 960 aaPredicted RBP27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 FTSJ3Q8IY81 847 aaKnown RBP27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 SERPINA10Q9UK55 444 aa27.42■■□□□ 1.98
SEMA3F-205ENST00000426511 COPRSQ9NQ92 184 aa27.41■■□□□ 1.98
SEMA3F-205ENST00000426511 ECM29Q5VYK3 1845 aa27.41■■□□□ 1.98
SEMA3F-205ENST00000426511 CRKP46108 304 aa27.4■■□□□ 1.98
SEMA3F-205ENST00000426511 RASAL3Q86YV0 1011 aa27.4■■□□□ 1.98
SEMA3F-205ENST00000426511 TDRD3Q9H7E2 651 aaKnown RBP27.4■■□□□ 1.98
SEMA3F-205ENST00000426511 FZD1Q9UP38 647 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms