RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 COL1A1P02452 1464 aaPredicted RBP18.75■□□□□ 0.59
PDAP1-202ENST00000426447 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
PDAP1-202ENST00000426447 CRHR2Q13324 411 aa18.74■□□□□ 0.59
PDAP1-202ENST00000426447 CFAP100Q494V2 611 aa18.74■□□□□ 0.59
PDAP1-202ENST00000426447 NBPF12Q5TAG4 269 aaPredicted RBP18.74■□□□□ 0.59
PDAP1-202ENST00000426447 MTMR14Q8NCE2 650 aa18.74■□□□□ 0.59
PDAP1-202ENST00000426447 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 TAF5LO75529 589 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 CSF1RP07333 972 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 SP3Q02447 781 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 GCKRQ14397 625 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 CERS5Q8N5B7 392 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 HELBQ8NG08 1087 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-202ENST00000426447 PRMT6Q96LA8 375 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-202ENST00000426447 TMEM106CQ9BVX2 250 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 PLA2G12BQ9BX93 195 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 PCDHAC2Q9Y5I4 1007 aa18.73■□□□□ 0.59
PDAP1-202ENST00000426447 SNAP23O00161 211 aa18.72■□□□□ 0.59
PDAP1-202ENST00000426447 USP2O75604 605 aaPredicted RBP18.72■□□□□ 0.59
PDAP1-202ENST00000426447 EN2P19622 333 aaPredicted RBP18.72■□□□□ 0.59
PDAP1-202ENST00000426447 G2E3Q7L622 706 aa18.72■□□□□ 0.59
PDAP1-202ENST00000426447 ZNF804AQ7Z570 1209 aa18.72■□□□□ 0.59
PDAP1-202ENST00000426447 ANKRD13AQ8IZ07 590 aa18.72■□□□□ 0.59
PDAP1-202ENST00000426447 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
PDAP1-202ENST00000426447 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
PDAP1-202ENST00000426447 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
PDAP1-202ENST00000426447 RASA3Q14644 834 aa18.71■□□□□ 0.59
PDAP1-202ENST00000426447 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
PDAP1-202ENST00000426447 SPEF2Q9C093 1822 aa18.7■□□□□ 0.58
PDAP1-202ENST00000426447 IFIT5Q13325 482 aaKnown RBP18.7■□□□□ 0.58
PDAP1-202ENST00000426447 ARHGEF6Q15052 776 aa18.7■□□□□ 0.58
PDAP1-202ENST00000426447 TWISTNBQ3B726 338 aaPredicted RBP18.7■□□□□ 0.58
PDAP1-202ENST00000426447 ARMC5Q96C12 935 aa18.7■□□□□ 0.58
PDAP1-202ENST00000426447 JAG2Q9Y219 1238 aa18.7■□□□□ 0.58
PDAP1-202ENST00000426447 IL1R1P14778 569 aa18.69■□□□□ 0.58
PDAP1-202ENST00000426447 GJA5P36382 358 aa18.69■□□□□ 0.58
PDAP1-202ENST00000426447 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
PDAP1-202ENST00000426447 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
PDAP1-202ENST00000426447 NBPF11Q86T75 865 aa18.69■□□□□ 0.58
PDAP1-202ENST00000426447 PTPN18Q99952 460 aa18.69■□□□□ 0.58
PDAP1-202ENST00000426447 ELP3Q9H9T3 547 aa18.69■□□□□ 0.58
PDAP1-202ENST00000426447 PLIN1O60240 522 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 CASP7P55210 303 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 FKBP1AP62942 108 aaKnown RBP18.68■□□□□ 0.58
PDAP1-202ENST00000426447 TNFAIP1Q13829 316 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 LINS1Q8NG48 757 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 DNAAF4Q8WXU2 420 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 SSC5DA1L4H1 1573 aa18.68■□□□□ 0.58
PDAP1-202ENST00000426447 TESPA1A2RU30 521 aaPredicted RBP18.67■□□□□ 0.58
PDAP1-202ENST00000426447 FLIIQ13045 1269 aa18.67■□□□□ 0.58
PDAP1-202ENST00000426447 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
PDAP1-202ENST00000426447 ZNF646O15015 1829 aaPredicted RBP18.67■□□□□ 0.58
PDAP1-202ENST00000426447 MYH3P11055 1940 aa18.66■□□□□ 0.58
PDAP1-202ENST00000426447 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
PDAP1-202ENST00000426447 SLC9C1Q4G0N8 1177 aa18.66■□□□□ 0.58
PDAP1-202ENST00000426447 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
PDAP1-202ENST00000426447 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
PDAP1-202ENST00000426447 IRS2Q9Y4H2 1338 aa18.66■□□□□ 0.58
PDAP1-202ENST00000426447 WDHD1O75717 1129 aaPredicted RBP18.65■□□□□ 0.58
PDAP1-202ENST00000426447 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
PDAP1-202ENST00000426447 TDRD3Q9H7E2 651 aaKnown RBP18.65■□□□□ 0.58
PDAP1-202ENST00000426447 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
PDAP1-202ENST00000426447 AOX1Q06278 1338 aa18.65■□□□□ 0.58
PDAP1-202ENST00000426447 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
PDAP1-202ENST00000426447 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
PDAP1-202ENST00000426447 ZNF333Q96JL9 665 aa18.64■□□□□ 0.57
PDAP1-202ENST00000426447 MS4A4AQ96JQ5 239 aa18.64■□□□□ 0.57
PDAP1-202ENST00000426447 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
PDAP1-202ENST00000426447 TTF2Q9UNY4 1162 aaKnown RBP18.64■□□□□ 0.57
PDAP1-202ENST00000426447 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 MYCP01106 439 aaPredicted RBP18.63■□□□□ 0.57
PDAP1-202ENST00000426447 TNNI2P48788 182 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDAP1-202ENST00000426447 GTF2A2P52657 109 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 FOXO4P98177 505 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 CCL15Q16663 113 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 MFSD14BQ5SR56 506 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 PTCH2Q9Y6C5 1203 aa18.63■□□□□ 0.57
PDAP1-202ENST00000426447 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
PDAP1-202ENST00000426447 CAP1Q01518 475 aa18.62■□□□□ 0.57
PDAP1-202ENST00000426447 LMBR1LQ6UX01 489 aa18.62■□□□□ 0.57
PDAP1-202ENST00000426447 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.62■□□□□ 0.57
PDAP1-202ENST00000426447 BRI3BPQ8WY22 251 aa18.62■□□□□ 0.57
PDAP1-202ENST00000426447 ZNF594Q96JF6 807 aaPredicted RBP18.62■□□□□ 0.57
PDAP1-202ENST00000426447 SERPINA10Q9UK55 444 aa18.62■□□□□ 0.57
PDAP1-202ENST00000426447 COLQQ9Y215 455 aaPredicted RBP18.62■□□□□ 0.57
PDAP1-202ENST00000426447 CSADQ9Y600 493 aa18.62■□□□□ 0.57
PDAP1-202ENST00000426447 KIF22Q14807 665 aa18.61■□□□□ 0.57
PDAP1-202ENST00000426447 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
PDAP1-202ENST00000426447 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
PDAP1-202ENST00000426447 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
PDAP1-202ENST00000426447 OTUD5Q96G74 571 aa18.61■□□□□ 0.57
PDAP1-202ENST00000426447 FAM205AQ6ZU69 1335 aa18.6■□□□□ 0.57
PDAP1-202ENST00000426447 HIBADHP31937 336 aaKnown RBP18.6■□□□□ 0.57
PDAP1-202ENST00000426447 VGLL4Q14135 290 aa18.6■□□□□ 0.57
PDAP1-202ENST00000426447 TMEM39BQ9GZU3 492 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms