RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 PODXL2Q9NZ53 605 aa16.1■□□□□ 0.17
SGCE-203ENST00000425444 XDHP47989 1333 aa16.1■□□□□ 0.17
SGCE-203ENST00000425444 IGHMBP2P38935 993 aaKnown RBP16.09■□□□□ 0.17
SGCE-203ENST00000425444 SLC4A8Q2Y0W8 1093 aa16.09■□□□□ 0.17
SGCE-203ENST00000425444 LDLRAD1Q5T700 205 aa16.09■□□□□ 0.17
SGCE-203ENST00000425444 SLC10A4Q96EP9 437 aa16.09■□□□□ 0.17
SGCE-203ENST00000425444 ZNF333Q96JL9 665 aa16.09■□□□□ 0.17
SGCE-203ENST00000425444 PLA2G12BQ9BX93 195 aa16.09■□□□□ 0.17
SGCE-203ENST00000425444 ANGEL1Q9UNK9 670 aaKnown RBP16.09■□□□□ 0.17
SGCE-203ENST00000425444 USP17L3A6NCW0 530 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 USP17L4A6NCW7 530 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 IGF2BP3O00425 579 aaKnown RBP eCLIP16.08■□□□□ 0.16
SGCE-203ENST00000425444 ITGA6P23229 1130 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 CASP7P55210 303 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
SGCE-203ENST00000425444 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.16
SGCE-203ENST00000425444 CHMP3Q9Y3E7 222 aa16.08■□□□□ 0.16
SGCE-203ENST00000425444 MYCP01106 439 aaPredicted RBP16.07■□□□□ 0.16
SGCE-203ENST00000425444 CRHR2Q13324 411 aa16.07■□□□□ 0.16
SGCE-203ENST00000425444 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
SGCE-203ENST00000425444 OGFOD1Q8N543 542 aa16.07■□□□□ 0.16
SGCE-203ENST00000425444 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
SGCE-203ENST00000425444 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
SGCE-203ENST00000425444 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
SGCE-203ENST00000425444 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
SGCE-203ENST00000425444 PSME4Q14997 1843 aa16.07■□□□□ 0.16
SGCE-203ENST00000425444 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
SGCE-203ENST00000425444 GRM8O00222 908 aa16.06■□□□□ 0.16
SGCE-203ENST00000425444 WNT10BO00744 389 aa16.06■□□□□ 0.16
SGCE-203ENST00000425444 ATP2B4P23634 1241 aa16.06■□□□□ 0.16
SGCE-203ENST00000425444 SP3Q02447 781 aa16.06■□□□□ 0.16
SGCE-203ENST00000425444 FZD1Q9UP38 647 aa16.06■□□□□ 0.16
SGCE-203ENST00000425444 PTPRCP08575 1304 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 ANKRD18BA2A2Z9 1011 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 SASH1O94885 1247 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 CSF1RP07333 972 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 ZBTB48P10074 688 aaPredicted RBP16.05■□□□□ 0.16
SGCE-203ENST00000425444 OTUD7BQ6GQQ9 843 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 PODNQ7Z5L7 613 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 MINPP1Q9UNW1 487 aa16.05■□□□□ 0.16
SGCE-203ENST00000425444 CAP1Q01518 475 aa16.04■□□□□ 0.16
SGCE-203ENST00000425444 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
SGCE-203ENST00000425444 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
SGCE-203ENST00000425444 DPF3Q92784 378 aa16.04■□□□□ 0.16
SGCE-203ENST00000425444 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
SGCE-203ENST00000425444 MXD3Q9BW11 206 aa16.04■□□□□ 0.16
SGCE-203ENST00000425444 CCT4P50991 539 aaKnown RBP16.03■□□□□ 0.16
SGCE-203ENST00000425444 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 TAF7LQ5H9L4 462 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 MIER1Q8N108 512 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 FBXW7Q969H0 707 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 CLMNQ96JQ2 1002 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 VCANP13611 3396 aa16.03■□□□□ 0.16
SGCE-203ENST00000425444 MED23Q9ULK4 1368 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 KCNJ4P48050 445 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 FOXO4P98177 505 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 ARHGEF6Q15052 776 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 ANKRD2Q9GZV1 360 aa16.02■□□□□ 0.16
SGCE-203ENST00000425444 CT47B1P0C2W7 299 aaPredicted RBP16.01■□□□□ 0.15
SGCE-203ENST00000425444 MNX1P50219 401 aaPredicted RBP16.01■□□□□ 0.15
SGCE-203ENST00000425444 DACT2Q5SW24 774 aa16.01■□□□□ 0.15
SGCE-203ENST00000425444 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
SGCE-203ENST00000425444 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
SGCE-203ENST00000425444 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
SGCE-203ENST00000425444 PPP1R12BO60237 982 aaPredicted RBP16■□□□□ 0.15
SGCE-203ENST00000425444 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
SGCE-203ENST00000425444 SUCLG2Q96I99 432 aa16■□□□□ 0.15
SGCE-203ENST00000425444 ZNF804BA4D1E1 1349 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 MYO3BQ8WXR4 1341 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 CHRNDQ07001 517 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 SH3TC2Q8TF17 1288 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 PTPN18Q99952 460 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 DEFB129Q9H1M3 183 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 CNNM1Q9NRU3 951 aa15.99■□□□□ 0.15
SGCE-203ENST00000425444 NBPF7P0C2Y1 421 aaPredicted RBP15.98■□□□□ 0.15
SGCE-203ENST00000425444 MAP3K11Q16584 847 aa15.98■□□□□ 0.15
SGCE-203ENST00000425444 GJA5P36382 358 aa15.97■□□□□ 0.15
SGCE-203ENST00000425444 MMP14P50281 582 aa15.97■□□□□ 0.15
SGCE-203ENST00000425444 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
SGCE-203ENST00000425444 STRIP1Q5VSL9 837 aa15.97■□□□□ 0.15
SGCE-203ENST00000425444 LDHAL6AQ6ZMR3 332 aa15.97■□□□□ 0.15
SGCE-203ENST00000425444 ZNF594Q96JF6 807 aaPredicted RBP15.97■□□□□ 0.15
SGCE-203ENST00000425444 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
SGCE-203ENST00000425444 UTYO14607 1347 aa15.96■□□□□ 0.15
SGCE-203ENST00000425444 TAF5LO75529 589 aa15.96■□□□□ 0.15
SGCE-203ENST00000425444 KLRK1P26718 216 aa15.96■□□□□ 0.15
SGCE-203ENST00000425444 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
SGCE-203ENST00000425444 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
SGCE-203ENST00000425444 PRO3102Q9H379 93 aa15.96■□□□□ 0.15
SGCE-203ENST00000425444 BICC1Q9H694 974 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms