RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 GGA3Q9NZ52 723 aa22.31■■□□□ 1.16
IGHV3-47-201ENST00000425060 MKRN1Q9UHC7 482 aaKnown RBP22.31■■□□□ 1.16
IGHV3-47-201ENST00000425060 WNT10BO00744 389 aa22.3■■□□□ 1.16
IGHV3-47-201ENST00000425060 NBPF9Q3BBW0 867 aa22.3■■□□□ 1.16
IGHV3-47-201ENST00000425060 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
IGHV3-47-201ENST00000425060 LPIN2Q92539 896 aa22.3■■□□□ 1.16
IGHV3-47-201ENST00000425060 JAG2Q9Y219 1238 aa22.3■■□□□ 1.16
IGHV3-47-201ENST00000425060 PNMA6EA0A0J9YXQ4 647 aa22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 CELF2O95319 508 aaKnown RBP22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 IFIT1P09914 478 aaKnown RBP22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 BCAMP50895 628 aa22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 CAVIN4Q5BKX8 364 aa22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 ANGEL2Q5VTE6 544 aaKnown RBP22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 CEP126Q9P2H0 1117 aa22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 HDAC9Q9UKV0 1011 aa22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 PITPNM2Q9BZ72 1349 aa22.29■■□□□ 1.16
IGHV3-47-201ENST00000425060 ADM5C9JUS6 153 aa22.28■■□□□ 1.16
IGHV3-47-201ENST00000425060 TLL2Q9Y6L7 1015 aa22.28■■□□□ 1.16
IGHV3-47-201ENST00000425060 DEFB115Q30KQ5 88 aa22.27■■□□□ 1.16
IGHV3-47-201ENST00000425060 VPS37DQ86XT2 251 aa22.27■■□□□ 1.16
IGHV3-47-201ENST00000425060 ITPRIPQ8IWB1 547 aa22.27■■□□□ 1.16
IGHV3-47-201ENST00000425060 MTMR14Q8NCE2 650 aa22.27■■□□□ 1.16
IGHV3-47-201ENST00000425060 PANK1Q8TE04 598 aa22.27■■□□□ 1.16
IGHV3-47-201ENST00000425060 RCAN3Q9UKA8 241 aa22.27■■□□□ 1.16
IGHV3-47-201ENST00000425060 SLC5A1P13866 664 aa22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 VEGFBP49765 207 aa22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 POLA2Q14181 598 aa22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 MFSD14BQ5SR56 506 aa22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 SULF1Q8IWU6 871 aa22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 ABT1Q9ULW3 272 aaKnown RBP22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 IQSEC3Q9UPP2 1182 aaPredicted RBP22.26■■□□□ 1.15
IGHV3-47-201ENST00000425060 ATP8B2P98198 1209 aa22.25■■□□□ 1.15
IGHV3-47-201ENST00000425060 ATP2B3Q16720 1220 aa22.25■■□□□ 1.15
IGHV3-47-201ENST00000425060 SAPCD2Q86UD0 394 aa22.25■■□□□ 1.15
IGHV3-47-201ENST00000425060 F8W031 263 aaPredicted RBP22.24■■□□□ 1.15
IGHV3-47-201ENST00000425060 PCDHAC2Q9Y5I4 1007 aa22.24■■□□□ 1.15
IGHV3-47-201ENST00000425060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.24■■□□□ 1.15
IGHV3-47-201ENST00000425060 MS4A1P11836 297 aa22.23■■□□□ 1.15
IGHV3-47-201ENST00000425060 GRIK5Q16478 980 aa22.23■■□□□ 1.15
IGHV3-47-201ENST00000425060 SSH3Q8TE77 659 aa22.23■■□□□ 1.15
IGHV3-47-201ENST00000425060 C1orf115Q9H7X2 142 aa22.23■■□□□ 1.15
IGHV3-47-201ENST00000425060 ZNF408Q9H9D4 720 aa22.23■■□□□ 1.15
IGHV3-47-201ENST00000425060 ZBTB22O15209 634 aa22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 TFCP2Q12800 502 aa22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 DLGAP5Q15398 846 aa22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 CDCA5Q96FF9 252 aa22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 HHIPL1Q96JK4 782 aa22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 SCAF8Q9UPN6 1271 aaKnown RBP22.22■■□□□ 1.15
IGHV3-47-201ENST00000425060 CHAF1AQ13111 956 aaPredicted RBP22.21■■□□□ 1.15
IGHV3-47-201ENST00000425060 TBC1D22AQ8WUA7 517 aa22.21■■□□□ 1.15
IGHV3-47-201ENST00000425060 PRMT6Q96LA8 375 aaPredicted RBP22.21■■□□□ 1.15
IGHV3-47-201ENST00000425060 TTF2Q9UNY4 1162 aaKnown RBP22.21■■□□□ 1.15
IGHV3-47-201ENST00000425060 ARAP2Q8WZ64 1704 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 SPDYE2BA6NHP3 402 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 SPDYE6P0CI01 402 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 ADORA1P30542 326 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 TIMM10P62072 90 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 GBA2Q9HCG7 927 aaPredicted RBP22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 AOX1Q06278 1338 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 WDR33Q9C0J8 1336 aaKnown RBP22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 PCNTO95613 3336 aa22.2■■□□□ 1.14
IGHV3-47-201ENST00000425060 SERPINA10Q9UK55 444 aa22.19■■□□□ 1.14
IGHV3-47-201ENST00000425060 COL1A1P02452 1464 aaPredicted RBP22.19■■□□□ 1.14
IGHV3-47-201ENST00000425060 A0A1B0GUL7 405 aa22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 PHKA1P46020 1223 aa22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 G3BP1Q13283 466 aaKnown RBP eCLIP22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 MVPQ14764 893 aaKnown RBP22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 CYP4F22Q6NT55 531 aa22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 CAPNS2Q96L46 248 aa22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 AKAP2Q9Y2D5 859 aa22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 SUGT1Q9Y2Z0 365 aa22.18■■□□□ 1.14
IGHV3-47-201ENST00000425060 HDLBPQ00341 1268 aaKnown RBP22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 PRAMEF18Q5VWM3 479 aa22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 CCDC102BQ68D86 513 aa22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 CEP85Q6P2H3 762 aa22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 APOBEC3FQ8IUX4 373 aaKnown RBP22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 C2orf69Q8N8R5 385 aa22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 MRIQ9BWK5 157 aa22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 NOP58Q9Y2X3 529 aaKnown RBP22.17■■□□□ 1.14
IGHV3-47-201ENST00000425060 ECE1P42892 770 aa22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 CRKP46108 304 aa22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 HUNKP57058 714 aa22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 WDR66Q8TBY9 1149 aa22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 XAGE2Q96GT9 111 aa22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 GNL3LQ9NVN8 582 aaKnown RBP22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
IGHV3-47-201ENST00000425060 ECM29Q5VYK3 1845 aa22.15■■□□□ 1.14
IGHV3-47-201ENST00000425060 SEMA3EO15041 775 aa22.15■■□□□ 1.14
IGHV3-47-201ENST00000425060 RBM5P52756 815 aaKnown RBP eCLIP22.15■■□□□ 1.14
IGHV3-47-201ENST00000425060 ZBTB40Q9NUA8 1239 aa22.15■■□□□ 1.14
IGHV3-47-201ENST00000425060 DDX19BQ9UMR2 479 aa22.15■■□□□ 1.14
IGHV3-47-201ENST00000425060 HSPA1AP0DMV8 641 aaKnown RBP22.14■■□□□ 1.13
IGHV3-47-201ENST00000425060 HSPA1BP0DMV9 641 aaKnown RBP22.14■■□□□ 1.13
IGHV3-47-201ENST00000425060 PDE3AQ14432 1141 aa22.14■■□□□ 1.13
IGHV3-47-201ENST00000425060 C20orf194Q5TEA3 1177 aa22.14■■□□□ 1.13
IGHV3-47-201ENST00000425060 DENND2AQ9ULE3 1009 aa22.14■■□□□ 1.13
IGHV3-47-201ENST00000425060 THSD7BQ9C0I4 1608 aa22.13■■□□□ 1.13
IGHV3-47-201ENST00000425060 SALL1Q9NSC2 1324 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms