RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
VRK3-203ENST00000424804 FKBP1AP62942 108 aaKnown RBP16.44■□□□□ 0.22
VRK3-203ENST00000424804 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
VRK3-203ENST00000424804 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
VRK3-203ENST00000424804 FZD1Q9UP38 647 aa16.44■□□□□ 0.22
VRK3-203ENST00000424804 KCNJ4P48050 445 aa16.43■□□□□ 0.22
VRK3-203ENST00000424804 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
VRK3-203ENST00000424804 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
VRK3-203ENST00000424804 PRMT6Q96LA8 375 aaPredicted RBP16.43■□□□□ 0.22
VRK3-203ENST00000424804 FAM205AQ6ZU69 1335 aa16.43■□□□□ 0.22
VRK3-203ENST00000424804 MAP3K11Q16584 847 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 APOBEC3FQ8IUX4 373 aaKnown RBP16.42■□□□□ 0.22
VRK3-203ENST00000424804 TDRD7Q8NHU6 1098 aaKnown RBP16.42■□□□□ 0.22
VRK3-203ENST00000424804 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 R3HDMLQ9H3Y0 253 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
VRK3-203ENST00000424804 LAMB1P07942 1786 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 PLIN1O60240 522 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 TBC1D8O95759 1140 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 PRKG1Q13976 671 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 RABL6Q3YEC7 729 aaPredicted RBP16.41■□□□□ 0.22
VRK3-203ENST00000424804 CFAP100Q494V2 611 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 ANKRD44Q8N8A2 993 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 FAM84BQ96KN1 310 aaPredicted RBP16.41■□□□□ 0.22
VRK3-203ENST00000424804 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
VRK3-203ENST00000424804 MLLT1Q03111 559 aaPredicted RBP16.4■□□□□ 0.22
VRK3-203ENST00000424804 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
VRK3-203ENST00000424804 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
VRK3-203ENST00000424804 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
VRK3-203ENST00000424804 COL1A1P02452 1464 aaPredicted RBP16.4■□□□□ 0.22
VRK3-203ENST00000424804 E9PSI1 815 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
VRK3-203ENST00000424804 GYG1P46976 350 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
VRK3-203ENST00000424804 UBE4AQ14139 1066 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 TTLL12Q14166 644 aaPredicted RBP16.39■□□□□ 0.21
VRK3-203ENST00000424804 GRIK5Q16478 980 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 SPRYD7Q5W111 196 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 ARMC9Q7Z3E5 817 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 CTU1Q7Z7A3 348 aaKnown RBP16.39■□□□□ 0.21
VRK3-203ENST00000424804 ZNF296Q8WUU4 475 aaPredicted RBP16.39■□□□□ 0.21
VRK3-203ENST00000424804 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 CFHR5Q9BXR6 569 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
VRK3-203ENST00000424804 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
VRK3-203ENST00000424804 NF2P35240 595 aa16.38■□□□□ 0.21
VRK3-203ENST00000424804 LRRC24Q50LG9 513 aa16.38■□□□□ 0.21
VRK3-203ENST00000424804 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
VRK3-203ENST00000424804 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
VRK3-203ENST00000424804 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
VRK3-203ENST00000424804 VGLL2Q8N8G2 317 aa16.38■□□□□ 0.21
VRK3-203ENST00000424804 CLMNQ96JQ2 1002 aa16.38■□□□□ 0.21
VRK3-203ENST00000424804 BICC1Q9H694 974 aaKnown RBP16.38■□□□□ 0.21
VRK3-203ENST00000424804 ANGEL1Q9UNK9 670 aaKnown RBP16.38■□□□□ 0.21
VRK3-203ENST00000424804 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
VRK3-203ENST00000424804 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
VRK3-203ENST00000424804 USP44Q9H0E7 712 aa16.37■□□□□ 0.21
VRK3-203ENST00000424804 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
VRK3-203ENST00000424804 GPR25O00155 361 aa16.36■□□□□ 0.21
VRK3-203ENST00000424804 HIBADHP31937 336 aaKnown RBP16.36■□□□□ 0.21
VRK3-203ENST00000424804 GJA5P36382 358 aa16.36■□□□□ 0.21
VRK3-203ENST00000424804 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
VRK3-203ENST00000424804 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
VRK3-203ENST00000424804 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
VRK3-203ENST00000424804 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
VRK3-203ENST00000424804 RASA3Q14644 834 aa16.35■□□□□ 0.21
VRK3-203ENST00000424804 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
VRK3-203ENST00000424804 CDAN1Q8IWY9 1227 aa16.35■□□□□ 0.21
VRK3-203ENST00000424804 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
VRK3-203ENST00000424804 TEPSINQ96N21 525 aa16.35■□□□□ 0.21
VRK3-203ENST00000424804 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
VRK3-203ENST00000424804 PDE4DIPQ5VU43 2346 aa16.35■□□□□ 0.21
VRK3-203ENST00000424804 RFX5P48382 616 aaPredicted RBP16.34■□□□□ 0.21
VRK3-203ENST00000424804 MFSD14BQ5SR56 506 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 WNK4Q96J92 1243 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 SERPINA10Q9UK55 444 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 OTOFQ9HC10 1997 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
VRK3-203ENST00000424804 HTTP42858 3142 aa16.33■□□□□ 0.21
VRK3-203ENST00000424804 UNCXA6NJT0 531 aa16.33■□□□□ 0.2
VRK3-203ENST00000424804 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.2
VRK3-203ENST00000424804 FGFR2P21802 821 aa16.33■□□□□ 0.2
VRK3-203ENST00000424804 SREBF2Q12772 1141 aa16.33■□□□□ 0.2
VRK3-203ENST00000424804 SLC10A4Q96EP9 437 aa16.33■□□□□ 0.2
VRK3-203ENST00000424804 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
VRK3-203ENST00000424804 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.2
VRK3-203ENST00000424804 PTPRCP08575 1304 aa16.33■□□□□ 0.2
VRK3-203ENST00000424804 PDE8BO95263 885 aa16.32■□□□□ 0.2
VRK3-203ENST00000424804 SOX10P56693 466 aa16.32■□□□□ 0.2
VRK3-203ENST00000424804 IFNL1Q8IU54 200 aa16.32■□□□□ 0.2
VRK3-203ENST00000424804 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms