RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 IFIT2P09913 472 aaKnown RBP25.29■■□□□ 1.64
PMS1-211ENST00000424766 FBXW7Q969H0 707 aa25.29■■□□□ 1.64
PMS1-211ENST00000424766 DENND2AQ9ULE3 1009 aa25.29■■□□□ 1.64
PMS1-211ENST00000424766 MYO3BQ8WXR4 1341 aa25.29■■□□□ 1.64
PMS1-211ENST00000424766 SMARCA5O60264 1052 aaPredicted RBP25.28■■□□□ 1.64
PMS1-211ENST00000424766 UQCRFS1P1P0C7P4 283 aa25.28■■□□□ 1.64
PMS1-211ENST00000424766 GMPSP49915 693 aaPredicted RBP25.28■■□□□ 1.64
PMS1-211ENST00000424766 ZNF526Q8TF50 670 aaPredicted RBP25.28■■□□□ 1.64
PMS1-211ENST00000424766 ZNF512BQ96KM6 892 aaPredicted RBP25.28■■□□□ 1.64
PMS1-211ENST00000424766 GMLQ99445 158 aa25.28■■□□□ 1.64
PMS1-211ENST00000424766 GPBP1L1Q9HC44 474 aaPredicted RBP25.28■■□□□ 1.64
PMS1-211ENST00000424766 VEGFAP15692 232 aaPredicted RBP25.27■■□□□ 1.64
PMS1-211ENST00000424766 ARID4AP29374 1257 aaPredicted RBP25.27■■□□□ 1.64
PMS1-211ENST00000424766 ZNF784Q8NCA9 323 aaPredicted RBP25.27■■□□□ 1.64
PMS1-211ENST00000424766 TBC1D22AQ8WUA7 517 aa25.27■■□□□ 1.64
PMS1-211ENST00000424766 RRAGCQ9HB90 399 aa25.27■■□□□ 1.64
PMS1-211ENST00000424766 TLR7Q9NYK1 1049 aaKnown RBP25.27■■□□□ 1.64
PMS1-211ENST00000424766 ZBTB47Q9UFB7 747 aaPredicted RBP25.27■■□□□ 1.64
PMS1-211ENST00000424766 ZBTB12Q9Y330 459 aaPredicted RBP25.27■■□□□ 1.64
PMS1-211ENST00000424766 IQCA1LA6NCM1 817 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 POTECB2RU33 542 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 SCNN1DP51172 638 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 TTC39AQ5SRH9 613 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 ANKRD45Q5TZF3 282 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 ERICH6BQ5W0A0 696 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 WDR66Q8TBY9 1149 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 GPRC5DQ9NZD1 345 aa25.26■■□□□ 1.63
PMS1-211ENST00000424766 PDS5AQ29RF7 1337 aaKnown RBP25.26■■□□□ 1.63
PMS1-211ENST00000424766 LMOD1P29536 600 aaPredicted RBP25.25■■□□□ 1.63
PMS1-211ENST00000424766 MMP14P50281 582 aa25.25■■□□□ 1.63
PMS1-211ENST00000424766 CHAF1AQ13111 956 aaPredicted RBP25.25■■□□□ 1.63
PMS1-211ENST00000424766 HACL1Q9UJ83 578 aa25.25■■□□□ 1.63
PMS1-211ENST00000424766 AKAP11Q9UKA4 1901 aa25.24■■□□□ 1.63
PMS1-211ENST00000424766 RASGRF1Q13972 1273 aa25.24■■□□□ 1.63
PMS1-211ENST00000424766 MXD3Q9BW11 206 aa25.24■■□□□ 1.63
PMS1-211ENST00000424766 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
PMS1-211ENST00000424766 NMRK2Q9NPI5 230 aa25.24■■□□□ 1.63
PMS1-211ENST00000424766 CNOT7Q9UIV1 285 aaKnown RBP25.24■■□□□ 1.63
PMS1-211ENST00000424766 MFSD14BQ5SR56 506 aa25.23■■□□□ 1.63
PMS1-211ENST00000424766 CERS5Q8N5B7 392 aa25.23■■□□□ 1.63
PMS1-211ENST00000424766 JAG2Q9Y219 1238 aa25.23■■□□□ 1.63
PMS1-211ENST00000424766 H7C1D1 291 aa25.22■■□□□ 1.63
PMS1-211ENST00000424766 EPS15P42566 896 aa25.22■■□□□ 1.63
PMS1-211ENST00000424766 HMG20BQ9P0W2 317 aa25.22■■□□□ 1.63
PMS1-211ENST00000424766 SUGT1Q9Y2Z0 365 aa25.22■■□□□ 1.63
PMS1-211ENST00000424766 SALL1Q9NSC2 1324 aa25.21■■□□□ 1.63
PMS1-211ENST00000424766 USP17L8P0C7I0 530 aa25.21■■□□□ 1.63
PMS1-211ENST00000424766 MCAMP43121 646 aa25.21■■□□□ 1.63
PMS1-211ENST00000424766 SPATA5Q8NB90 893 aa25.21■■□□□ 1.63
PMS1-211ENST00000424766 COL1A1P02452 1464 aaPredicted RBP25.21■■□□□ 1.63
PMS1-211ENST00000424766 ZNF280AP59817 542 aaPredicted RBP25.2■■□□□ 1.62
PMS1-211ENST00000424766 NUCB1Q02818 461 aa25.2■■□□□ 1.62
PMS1-211ENST00000424766 MICALL2Q8IY33 904 aa25.2■■□□□ 1.62
PMS1-211ENST00000424766 OGFOD1Q8N543 542 aa25.2■■□□□ 1.62
PMS1-211ENST00000424766 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.2■■□□□ 1.62
PMS1-211ENST00000424766 TAF1DQ9H5J8 278 aaPredicted RBP25.2■■□□□ 1.62
PMS1-211ENST00000424766 EPHX2P34913 555 aa25.19■■□□□ 1.62
PMS1-211ENST00000424766 SCARF1Q14162 830 aa25.19■■□□□ 1.62
PMS1-211ENST00000424766 B4GALNT3Q6L9W6 998 aa25.19■■□□□ 1.62
PMS1-211ENST00000424766 KIAA0825Q8IV33 1275 aa25.19■■□□□ 1.62
PMS1-211ENST00000424766 ZGPATQ8N5A5 531 aaKnown RBP25.19■■□□□ 1.62
PMS1-211ENST00000424766 ADARB2Q9NS39 739 aaKnown RBP25.19■■□□□ 1.62
PMS1-211ENST00000424766 HDAC9Q9UKV0 1011 aa25.19■■□□□ 1.62
PMS1-211ENST00000424766 ATP5JP18859 108 aa25.18■■□□□ 1.62
PMS1-211ENST00000424766 C16orf71Q8IYS4 520 aaPredicted RBP25.18■■□□□ 1.62
PMS1-211ENST00000424766 USP50Q70EL3 339 aaPredicted RBP25.17■■□□□ 1.62
PMS1-211ENST00000424766 PNMA8AQ86V59 439 aaPredicted RBP25.17■■□□□ 1.62
PMS1-211ENST00000424766 CHD1LQ86WJ1 897 aa25.17■■□□□ 1.62
PMS1-211ENST00000424766 GPATCH3Q96I76 525 aa25.17■■□□□ 1.62
PMS1-211ENST00000424766 SHTN1A0MZ66 631 aa25.16■■□□□ 1.62
PMS1-211ENST00000424766 KIF3CO14782 793 aa25.16■■□□□ 1.62
PMS1-211ENST00000424766 SPTY2D1Q68D10 685 aaPredicted RBP25.16■■□□□ 1.62
PMS1-211ENST00000424766 PI16Q6UXB8 463 aa25.16■■□□□ 1.62
PMS1-211ENST00000424766 MRIQ9BWK5 157 aa25.16■■□□□ 1.62
PMS1-211ENST00000424766 SNRKQ9NRH2 765 aa25.16■■□□□ 1.62
PMS1-211ENST00000424766 ECHDC1Q9NTX5 307 aa25.16■■□□□ 1.62
PMS1-211ENST00000424766 LNPKQ9C0E8 428 aa25.15■■□□□ 1.62
PMS1-211ENST00000424766 TTF2Q9UNY4 1162 aaKnown RBP25.15■■□□□ 1.62
PMS1-211ENST00000424766 MAST3O60307 1309 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 TTC41PQ6P2S7 1318 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 F8W031 263 aaPredicted RBP25.14■■□□□ 1.62
PMS1-211ENST00000424766 LDHBP07195 334 aaKnown RBP25.14■■□□□ 1.62
PMS1-211ENST00000424766 ZAP70P43403 619 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 HDLBPQ00341 1268 aaKnown RBP25.14■■□□□ 1.62
PMS1-211ENST00000424766 GRIK5Q16478 980 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 SAMD7Q7Z3H4 446 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 CCDC136Q96JN2 1154 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 MYOZ2Q9NPC6 264 aa25.14■■□□□ 1.62
PMS1-211ENST00000424766 SALL3Q9BXA9 1300 aa25.13■■□□□ 1.61
PMS1-211ENST00000424766 IGSF3O75054 1194 aa25.13■■□□□ 1.61
PMS1-211ENST00000424766 CYP2E1P05181 493 aaPredicted RBP25.13■■□□□ 1.61
PMS1-211ENST00000424766 ABCF2Q9UG63 623 aa25.13■■□□□ 1.61
PMS1-211ENST00000424766 MX1P20591 662 aa25.12■■□□□ 1.61
PMS1-211ENST00000424766 PRDX5P30044 214 aa25.12■■□□□ 1.61
PMS1-211ENST00000424766 RBM26Q5T8P6 1007 aaKnown RBP25.12■■□□□ 1.61
PMS1-211ENST00000424766 ERICH6Q7L0X2 663 aa25.12■■□□□ 1.61
PMS1-211ENST00000424766 CENPQQ7L2Z9 268 aaPredicted RBP25.12■■□□□ 1.61
PMS1-211ENST00000424766 MTMR14Q8NCE2 650 aa25.12■■□□□ 1.61
PMS1-211ENST00000424766 OTUD7AQ8TE49 926 aaPredicted RBP25.12■■□□□ 1.61
PMS1-211ENST00000424766 PPP4R2Q9NY27 417 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms