RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 ARID4AP29374 1257 aaPredicted RBP17.05■□□□□ 0.32
ACTN4-203ENST00000424234 PDE1AP54750 535 aa17.05■□□□□ 0.32
ACTN4-203ENST00000424234 FBXO33Q7Z6M2 555 aa17.05■□□□□ 0.32
ACTN4-203ENST00000424234 KIF2CQ99661 725 aa17.05■□□□□ 0.32
ACTN4-203ENST00000424234 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
ACTN4-203ENST00000424234 AOX1Q06278 1338 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 PPIP5K2O43314 1243 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 PRELPP51888 382 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 CAVIN4Q5BKX8 364 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 PI4K2BQ8TCG2 481 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
ACTN4-203ENST00000424234 HIBADHP31937 336 aaKnown RBP17.03■□□□□ 0.32
ACTN4-203ENST00000424234 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
ACTN4-203ENST00000424234 GPR162Q16538 588 aa17.03■□□□□ 0.32
ACTN4-203ENST00000424234 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
ACTN4-203ENST00000424234 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
ACTN4-203ENST00000424234 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
ACTN4-203ENST00000424234 SDSP20132 328 aa17.02■□□□□ 0.32
ACTN4-203ENST00000424234 MCAMP43121 646 aa17.02■□□□□ 0.32
ACTN4-203ENST00000424234 SCARF1Q14162 830 aa17.02■□□□□ 0.32
ACTN4-203ENST00000424234 ARHGAP27Q6ZUM4 889 aa17.02■□□□□ 0.32
ACTN4-203ENST00000424234 VPS37DQ86XT2 251 aa17.02■□□□□ 0.32
ACTN4-203ENST00000424234 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.32
ACTN4-203ENST00000424234 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
ACTN4-203ENST00000424234 IQSEC3Q9UPP2 1182 aaPredicted RBP17.02■□□□□ 0.32
ACTN4-203ENST00000424234 ATP5JP18859 108 aa17.02■□□□□ 0.31
ACTN4-203ENST00000424234 RASGRF1Q13972 1273 aa17.02■□□□□ 0.31
ACTN4-203ENST00000424234 COA1Q9GZY4 146 aa17.02■□□□□ 0.31
ACTN4-203ENST00000424234 DBNDD1Q9H9R9 158 aa17.02■□□□□ 0.31
ACTN4-203ENST00000424234 CD209Q9NNX6 404 aa17.02■□□□□ 0.31
ACTN4-203ENST00000424234 ZBTB22O15209 634 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 ECE2O60344 883 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 UQCRFS1P1P0C7P4 283 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 IL1R1P14778 569 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 DOK7Q18PE1 504 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
ACTN4-203ENST00000424234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.01■□□□□ 0.31
ACTN4-203ENST00000424234 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
ACTN4-203ENST00000424234 FOCADQ5VW36 1801 aa17■□□□□ 0.31
ACTN4-203ENST00000424234 ERC2O15083 957 aa17■□□□□ 0.31
ACTN4-203ENST00000424234 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
ACTN4-203ENST00000424234 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
ACTN4-203ENST00000424234 BOLA2Q9H3K6 86 aa17■□□□□ 0.31
ACTN4-203ENST00000424234 GNL3LQ9NVN8 582 aaKnown RBP17■□□□□ 0.31
ACTN4-203ENST00000424234 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 SEMA3EO15041 775 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 DDIT3P35638 169 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 RABEP1Q15276 862 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 HMG20BQ9P0W2 317 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 NDUFB9Q9Y6M9 179 aa16.99■□□□□ 0.31
ACTN4-203ENST00000424234 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
ACTN4-203ENST00000424234 K7ELQ4 463 aaPredicted RBP16.98■□□□□ 0.31
ACTN4-203ENST00000424234 REC8O95072 547 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 HAUS7Q99871 368 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 GRIN3BO60391 1043 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 LMNB1P20700 586 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 SNRKQ9NRH2 765 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
ACTN4-203ENST00000424234 G3V3G9 751 aa16.97■□□□□ 0.31
ACTN4-203ENST00000424234 MCM4P33991 863 aa16.97■□□□□ 0.31
ACTN4-203ENST00000424234 ZAP70P43403 619 aa16.97■□□□□ 0.31
ACTN4-203ENST00000424234 DCAF8Q5TAQ9 597 aa16.97■□□□□ 0.31
ACTN4-203ENST00000424234 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
ACTN4-203ENST00000424234 JAG2Q9Y219 1238 aa16.97■□□□□ 0.31
ACTN4-203ENST00000424234 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
ACTN4-203ENST00000424234 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.31
ACTN4-203ENST00000424234 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
ACTN4-203ENST00000424234 MAP4K4O95819 1239 aaPredicted RBP16.95■□□□□ 0.3
ACTN4-203ENST00000424234 CYP2E1P05181 493 aaPredicted RBP16.95■□□□□ 0.3
ACTN4-203ENST00000424234 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
ACTN4-203ENST00000424234 KCNQ5Q9NR82 932 aa16.95■□□□□ 0.3
ACTN4-203ENST00000424234 ZNRF3Q9ULT6 936 aa16.95■□□□□ 0.3
ACTN4-203ENST00000424234 SCN4AP35499 1836 aa16.95■□□□□ 0.3
ACTN4-203ENST00000424234 GOLIM4O00461 696 aa16.94■□□□□ 0.3
ACTN4-203ENST00000424234 GTF2IP78347 998 aa16.94■□□□□ 0.3
ACTN4-203ENST00000424234 PAG1Q9NWQ8 432 aa16.94■□□□□ 0.3
ACTN4-203ENST00000424234 RNF181Q9P0P0 153 aa16.94■□□□□ 0.3
ACTN4-203ENST00000424234 FZD9O00144 591 aa16.94■□□□□ 0.3
ACTN4-203ENST00000424234 SALL1Q9NSC2 1324 aa16.93■□□□□ 0.3
ACTN4-203ENST00000424234 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
ACTN4-203ENST00000424234 BAZ2AQ9UIF9 1905 aaKnown RBP16.93■□□□□ 0.3
ACTN4-203ENST00000424234 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
ACTN4-203ENST00000424234 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
ACTN4-203ENST00000424234 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
ACTN4-203ENST00000424234 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
ACTN4-203ENST00000424234 ZNF541Q9H0D2 1346 aa16.93■□□□□ 0.3
ACTN4-203ENST00000424234 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
ACTN4-203ENST00000424234 RFX7Q2KHR2 1363 aa16.92■□□□□ 0.3
ACTN4-203ENST00000424234 USP17L3A6NCW0 530 aa16.92■□□□□ 0.3
ACTN4-203ENST00000424234 USP17L4A6NCW7 530 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms