RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 UFL1O94874 794 aa9.86□□□□□ -0.83
HLA-DQA1-204ENST00000422863 PPP2R1AP30153 589 aa9.86□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ZNF280AP59817 542 aaPredicted RBP9.86□□□□□ -0.83
HLA-DQA1-204ENST00000422863 HSP90AB3PQ58FF7 597 aa9.86□□□□□ -0.83
HLA-DQA1-204ENST00000422863 SEC31BQ9NQW1 1179 aa9.86□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ERBB4Q15303 1308 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ZSWIM8A7E2V4 1837 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 WTIPA6NIX2 430 aaPredicted RBP9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 MYCP01106 439 aaPredicted RBP9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 USP17L8P0C7I0 530 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 RPS8P62241 208 aaKnown RBP9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 SREBF2Q12772 1141 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 AGBL3Q8NEM8 1001 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 CD99L2Q8TCZ2 262 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 FBXW7Q969H0 707 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ANKIB1Q9P2G1 1089 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 A0A0C4DFX4 3053 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 COL6A3P12111 3177 aa9.85□□□□□ -0.83
HLA-DQA1-204ENST00000422863 NEFMP07197 916 aa9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 CAP1Q01518 475 aa9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 SF3B3Q15393 1217 aaKnown RBP9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 INTS3Q68E01 1043 aaKnown RBP9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 JARID2Q92833 1246 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 CCDC85AQ96PX6 553 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 GMLQ99445 158 aa9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ANGEL1Q9UNK9 670 aaKnown RBP9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 PTPN22Q9Y2R2 807 aa9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ECM29Q5VYK3 1845 aa9.84□□□□□ -0.83
HLA-DQA1-204ENST00000422863 PITPNM2Q9BZ72 1349 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 H0YGN5 161 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 NF2P35240 595 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 TRIM26Q12899 539 aaPredicted RBP9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 NFE2L2Q16236 605 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 KRT24Q2M2I5 525 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 SPRYD7Q5W111 196 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ARMC9Q7Z3E5 817 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 GGA1Q9UJY5 639 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 LAMB1P07942 1786 aa9.83□□□□□ -0.84
HLA-DQA1-204ENST00000422863 MYH3P11055 1940 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 USP17L3A6NCW0 530 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 USP17L4A6NCW7 530 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 IGF2BP3O00425 579 aaKnown RBP eCLIP9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 WNT10BO00744 389 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 IRS4O14654 1257 aaPredicted RBP9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 SASH1O94885 1247 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PSEN2P49810 448 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 USP17L1Q7RTZ2 530 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 SLC17A8Q8NDX2 589 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 SLC10A4Q96EP9 437 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PLEKHF1Q96S99 279 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 EFCC1Q9HA90 598 aa9.82□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PTPN5P54829 565 aa9.81□□□□□ -0.84
HLA-DQA1-204ENST00000422863 CLMNQ96JQ2 1002 aa9.81□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ISCA1Q9BUE6 129 aa9.81□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PODXL2Q9NZ53 605 aa9.81□□□□□ -0.84
HLA-DQA1-204ENST00000422863 CHPF2Q9P2E5 772 aa9.81□□□□□ -0.84
HLA-DQA1-204ENST00000422863 RANBP2P49792 3224 aaKnown RBP9.81□□□□□ -0.84
HLA-DQA1-204ENST00000422863 MANSC4A6NHS7 340 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ALDH1A1P00352 501 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 CRHR2Q13324 411 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 SLC4A8Q2Y0W8 1093 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 LDLRAD1Q5T700 205 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 Q6ZNB5 142 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ARMC5Q96C12 935 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ERO1AQ96HE7 468 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 LAS1LQ9Y4W2 734 aaKnown RBP9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 OTOFQ9HC10 1997 aa9.8□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ECM2O94769 699 aaPredicted RBP9.79□□□□□ -0.84
HLA-DQA1-204ENST00000422863 RIPK4P57078 832 aa9.79□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
HLA-DQA1-204ENST00000422863 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
HLA-DQA1-204ENST00000422863 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
HLA-DQA1-204ENST00000422863 CUL9Q8IWT3 2517 aa9.79□□□□□ -0.84
HLA-DQA1-204ENST00000422863 INHBEP58166 350 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 SP3Q02447 781 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 DACT2Q5SW24 774 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PODNQ7Z5L7 613 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 KIAA0825Q8IV33 1275 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ZNF333Q96JL9 665 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PTPN18Q99952 460 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PCDHAC2Q9Y5I4 1007 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 PTCH2Q9Y6C5 1203 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 MAPK8IP3Q9UPT6 1336 aa9.78□□□□□ -0.84
HLA-DQA1-204ENST00000422863 ZNF609O15014 1411 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 ATP2B4P23634 1241 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 GJA5P36382 358 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 SLC9C1Q4G0N8 1177 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 TXNRD3Q86VQ6 643 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 SH3TC2Q8TF17 1288 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 DPF3Q92784 378 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 XDHP47989 1333 aa9.77□□□□□ -0.85
HLA-DQA1-204ENST00000422863 NEUROD2Q15784 382 aa9.76□□□□□ -0.85
HLA-DQA1-204ENST00000422863 CCDC152Q4G0S7 254 aa9.76□□□□□ -0.85
HLA-DQA1-204ENST00000422863 TTLL5Q6EMB2 1281 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms