RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 BIN1O00499 593 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 ATP1A3P13637 1013 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 KIFC2Q96AC6 838 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 ALDH8A1Q9H2A2 487 aaPredicted RBP15.23■□□□□ 0.03
CALD1-205ENST00000422748 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 EIF4A2Q14240 407 aaKnown RBP15.23■□□□□ 0.03
CALD1-205ENST00000422748 PTPN21Q16825 1174 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 TADA2BQ86TJ2 420 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 FMR1NBQ8N0W7 255 aaPredicted RBP15.23■□□□□ 0.03
CALD1-205ENST00000422748 DPF2Q92785 391 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 NUDT16Q96DE0 195 aaKnown RBP15.23■□□□□ 0.03
CALD1-205ENST00000422748 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
CALD1-205ENST00000422748 KIAA1468Q9P260 1216 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 ZNF142P52746 1687 aaPredicted RBP15.23■□□□□ 0.03
CALD1-205ENST00000422748 PRR36Q9H6K5 1346 aa15.23■□□□□ 0.03
CALD1-205ENST00000422748 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
CALD1-205ENST00000422748 WWC2Q6AWC2 1192 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 FCHSD1Q86WN1 690 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 MICALL1Q8N3F8 863 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 CNNM3Q8NE01 707 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 HNRNPLLQ8WVV9 542 aaKnown RBP15.22■□□□□ 0.03
CALD1-205ENST00000422748 CEP89Q96ST8 783 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 DONSONQ9NYP3 566 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 NPHP4O75161 1426 aaPredicted RBP15.22■□□□□ 0.03
CALD1-205ENST00000422748 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 PHACTR2O75167 634 aa15.22■□□□□ 0.03
CALD1-205ENST00000422748 EIF3JO75822 258 aaKnown RBP15.22■□□□□ 0.03
CALD1-205ENST00000422748 FOXO3O43524 673 aa15.21■□□□□ 0.03
CALD1-205ENST00000422748 TMEM139Q8IV31 216 aa15.21■□□□□ 0.03
CALD1-205ENST00000422748 COG3Q96JB2 828 aa15.21■□□□□ 0.03
CALD1-205ENST00000422748 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
CALD1-205ENST00000422748 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
CALD1-205ENST00000422748 PNKPQ96T60 521 aa15.21■□□□□ 0.03
CALD1-205ENST00000422748 ABCB6Q9NP58 842 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 L1RE1Q9UN81 338 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 AMOTL2Q9Y2J4 779 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 MON2Q7Z3U7 1717 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 A0A087WUV0 522 aaPredicted RBP15.2■□□□□ 0.02
CALD1-205ENST00000422748 ARHGAP6O43182 974 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 PPFIA4O75335 1185 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 MAP2K2P36507 400 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 NDUFA8P51970 172 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 UBASH3AP57075 661 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 ERC1Q8IUD2 1116 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 ANKRD20A12PQ8NF67 263 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 EVI5LQ96CN4 794 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 SIL1Q9H173 461 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 HSD3B7Q9H2F3 369 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 ECHDC1Q9NTX5 307 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 PCDHA7Q9UN72 937 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 TOPAZ1Q8N9V7 1692 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 FAM208AQ9UK61 1670 aaKnown RBP15.2■□□□□ 0.02
CALD1-205ENST00000422748 AKAP12Q02952 1782 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 USP5P45974 858 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 ISM2Q6H9L7 571 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 DNAAF4Q8WXU2 420 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 KAT2BQ92831 832 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 SUFUQ9UMX1 484 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 NEDD4P46934 1319 aa15.2■□□□□ 0.02
CALD1-205ENST00000422748 EDC4Q6P2E9 1401 aaKnown RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 ITSN1Q15811 1721 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 TMEM232C9JQI7 657 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 NLRP12P59046 1061 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 SKIDA1Q1XH10 827 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 TOGARAM2Q6ZUX3 1019 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 MSL3Q8N5Y2 521 aaKnown RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 CCDC12Q8WUD4 166 aaPredicted RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 PUF60Q9UHX1 559 aaKnown RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 A0A0D9SFI3 127 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 SERPINC1P01008 464 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 CFAP100Q494V2 611 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 HSP90B2PQ58FF3 399 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 DNAJC21Q5F1R6 531 aaKnown RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 SRGAP1Q7Z6B7 1085 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 FAM204AQ9H8W3 233 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 RAB21Q9UL25 225 aa15.19■□□□□ 0.02
CALD1-205ENST00000422748 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
CALD1-205ENST00000422748 GOLGA6L9A6NEM1 432 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
CALD1-205ENST00000422748 ATP6V1AP38606 617 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
CALD1-205ENST00000422748 VSTM4Q8IW00 320 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 N4BP2Q86UW6 1770 aaPredicted RBP15.18■□□□□ 0.02
CALD1-205ENST00000422748 CUTAO60888 179 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 ERLIN1O75477 346 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 SCRN1Q12765 414 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 CASP8Q14790 479 aa15.18■□□□□ 0.02
CALD1-205ENST00000422748 KARSQ15046 597 aaKnown RBP15.18■□□□□ 0.02
CALD1-205ENST00000422748 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
CALD1-205ENST00000422748 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
CALD1-205ENST00000422748 SLC3A2P08195 630 aaKnown RBP15.17■□□□□ 0.02
CALD1-205ENST00000422748 NBPF7P0C2Y1 421 aaPredicted RBP15.17■□□□□ 0.02
CALD1-205ENST00000422748 TTLL5Q6EMB2 1281 aa15.17■□□□□ 0.02
CALD1-205ENST00000422748 Q6ZUG5 572 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms